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Job DescriptionP46068
Confidence100.00%DateThu Jan 5 12:03:56 GMT 2012
Rank6Aligned Residues285
% Identity15%Templatec3ispA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:hth-type transcriptional regulator PDBTitle: crystal structure of argp from mycobacterium tuberculosis
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  GWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEI
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Template Sequence  QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR. EKPCRATTAGIPLLRLAAQTALLESEAL
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ST
TTTT

TS


.SSS

GGGT
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   5....10.........20.........30.........40.........50..... ....60.........70.........80...
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  LDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEE
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Template Sequence  AEMGASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRY
Template Known Secondary structure  TTT

TT


TTGGGGGTT

S

TTS
SS

S

TT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  ILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAM
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Template Sequence  LPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDG. . . . . . LQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGM
Template Known Secondary structure 

TT
S
TTTTTTS
B

SSTT

......SS




B



STTS
B
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   166...170.........180.........190.........200 .........210.........220.........230.........
 
   254.....260.........270.........280.........290.........300.........
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Query Sequence  GRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQVKT
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Template Sequence  FPEKLAASPLADGSFVRVCD. . . . IHLDVPLYWQCWKLDSPIIARITDTVRAAASG
Template Known Secondary structure  SS
SSS....

SS

TTT
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   240.........250......... 260.........270.........280.........290.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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