Job Description P46068 Confidence 99.60% Date Thu Jan 5 12:03:56 GMT 2012 Rank 18 Aligned Residues 200 % Identity 17% Template c3fd3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:chromosome replication initiation inhibitor protein; PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58. Resolution 1.70 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.															.
Query SS confidence																															.															.
Query Sequence		S	G	T	L	T	L	Y	S	R	P	S	I	A	Q	C	W	L	V	P	A	L	G	D	F	T	R	R	Y	P	.	S	I	S	L	T	V	L	T	G	N	D	N	V	N	.	L	Q	R	A	G	I	D	L	A	I	Y	F	D	D	A	P	S	A	Q	L	T	H	H	F	L	M	D	E	E	I	L	P	V	C	S
Query Conservation																															.															.
Alig confidence																															.															.
Template Conservation
Template Sequence		R	V	T	L	N	I	A	T	N	A	D	S	L	G	T	W	F	L	D	A	V	S	K	F	T	G	G	S	D	Y	L	V	N	I	A	V	D	D	Q	D	H	T	V	E	W	L	R	G	G	R	V	L	A	A	V	T	A	H	D	K	P	V	Q	G	C	R	V	T	P	L	G	V	L	R	Y	H	A	T	A	S
Template Known Secondary structure															T	T	T											T	S	S										S	S								T	T	S		S					S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		P	E	Y	.	A	Q	R	H	A	L	T	N	T	V	I	N	L	C	H	C	T	L	L	H	D	R	Q	A	W	S	N	D	S	G	T	D	E	W	H	S	W	A	Q	H	Y	A	V	N	L	P	T	S	S	G	I	G	F	D	R	S	D	L	A	V	I	A	A	M	N	H	I	G	V	A	M	G	R	K	R	L
Query Conservation					.
Alig confidence					.																											.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		P	D	F	X	A	R	H	F	A	D	G	V	T	P	A	A	L	A	R	A	P	G	L	T	F	N	Q	K	D	R	.	.	.	.	.	.	L	Q	A	S	W	I	R	T	A	L	G	E	D	V	S	Y	P	T	H	W	L	P	S	T	D	G	F	V	K	A	S	L	A	G	X	G	W	G	L	N	P	V	Q	L
Template Known Secondary structure										T	T		S						T	T	S					S	S	T	T			.	.	.	.	.	.											S	S																					T	T	S		B
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.							.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	K	R	L	A	S	G	E	L	V	A	P	F	G	D	M	T	V	K	C	H	Q	H	Y	Y	I	T	T	L	P	G	R	Q	W	P	K	I	E	A	F	I	I	W	L	R	E	Q	V	K	T	T
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		V	A	E	H	L	A	A	G	R	L	V	E	L	X	P	G	T	P	L	.	.	.	D	I	P	L	Y	W	Q	V	N	R	L	A	A	E	R	L	A	G	L	T	A	N	X	V	G	T	A	R	V	V
Template Known Secondary structure									T	S	S			S	S	T	T				.	.	.										T	T	T	T	T	T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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