Job Description P46068 Confidence 42.11% Date Thu Jan 5 12:03:56 GMT 2012 Rank 326 Aligned Residues 100 % Identity 12% Template c1zvvA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:glucose-resistance amylase regulator; PDBTitle: crystal structure of a ccpa-crh-dna complex Resolution 2.98 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	A	L	A	A	E	E	L	S	L	S	P	S	A	V	S	H	R	I	N	Q	L	E	E	E	L	G	I	Q	L	F	V	R	S	H	R	K	V	E	L	T	H	E	G	K	R	V	Y	W	A	L	K	S	S	L	D	T	L	N	Q	E	I	L	D	I	K	N	Q	E	L	S	G	T	L	T	L	Y	S	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	Y	D	V	A	R	E	A	S	V	S	M	A	T	V	S	R	V	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	P	N	V	K	P	S	T	R	K	K	V	L	E	T	I	E	R	L	G	Y	R	P	N	A	V	A	R	G	L	A	S	K	K	T	T	T	V	G	V	I	I	P	D
Template Known Secondary structure			S							T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S		S																T													T			S							S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.															.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	I	A	Q	C	W	L	V	P	A	L	G	D	F	T	R	R	Y	P	S	I	S	L	T	V	L	T	G	N	D	N	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	N	I	F	Y	A	E	L	A	R	G	I	E	D	I	A	S	M	Y	K	Y	N	I	I	L	S	N	S	D	Q	N	Q	D
Template Known Secondary structure		T	T	S																	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions