Job Description P46068 Confidence 96.88% Date Thu Jan 5 12:03:56 GMT 2012 Rank 90 Aligned Residues 92 % Identity 14% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																						.	.	.	.	.
Query SS confidence																			.	.	.	.																																						.	.	.	.	.
Query Sequence		G	W	Q	L	S	K	M	H	T	F	E	V	A	A	R	H	Q	.	.	.	.	S	F	A	L	A	A	E	E	L	S	L	S	P	S	A	V	S	H	R	I	N	Q	L	E	E	E	L	G	I	Q	L	F	V	R	S	H	R	.	.	.	.	.	K	V	E	L	T	H	E	G	K	R	V	Y	W	A	L	K	S
Query Conservation																			.	.	.	.																																						.	.	.	.	.
Alig confidence																			.	.	.	.																											.											.	.	.	.	.
Template Conservation																																																	.
Template Sequence		D	M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	.	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T
Template Known Secondary structure		S	S													S		S		S											S	S	S		G	G	G	T										T	.	T	S							S	S	S	T	T	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	T	L	N	Q	E	I	L	D	I	K	N	Q	E	L	S	G	T	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	D	Q	I	I	K	Q	F	N	L	A	D	Q	S	E	S	Q	M	I	P	K
Template Known Secondary structure														T	T			S	S		S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions