Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence99.65%DateThu Jan 5 11:26:54 GMT 2012
Rank212Aligned Residues228
% Identity12%Templated1y1pa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  MQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFN
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Template Sequence  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH
Template Known Secondary structure  TT
TTTSTT
SSSTTT
S
TTSTTTTTTTTTT
S
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   94.....100.........110.........120.........130.........140...... ...150..
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Query Sequence  NAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSS. . . . . . . . . . . . . . . . . . . . . VMGLIS
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Template Sequence  IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP
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S

S
T
TT



GGGT



TT




TT


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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   153......160.........170.........180.........190.........200.........210...... ...220.
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Query Sequence  TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAA. . . . . . . . . . . RFTLG
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Template Sequence  QKSLWVYAASKTEAELAAWKFMDENKPH. FTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVS
Template Known Secondary structure  T

S.SS


S
TTT


TT


T

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   171........180.........190........ .200.........210.........220.........230.........240.........
 
   222.......230.........240..
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Query Sequence  PEAVVDKVRHAFISEKPKMRY
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Template Sequence  AVDIGLLHLGCLVLPQIERRR
Template Known Secondary structure 
TT

S
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   250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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