Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence99.97%DateThu Jan 5 11:26:54 GMT 2012
Rank95Aligned Residues224
% Identity21%Templated1g0oa_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50........ .60.........70.........80
Predicted Secondary structure 
















.......
















Query SS confidence 


















































. . . . . . .





















Query Sequence  ILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSM. . . . . . . GFTGVLIDLDSPESVDRAADEV
Query Conservation   
   
 

 










  

  

  
  
    
    
      .......       
              
Alig confidence 


















































.......





















Template Conservation       
 


 





 


 


  
   

 


                            
              
Template Sequence  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA
Template Known Secondary structure  GGGG

TT
TTTTSTT
SS
TT



TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  IALTDNCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
Query Conservation                                                                  

            
 
Alig confidence 





.












































.


























Template Conservation        .                                             .                         
 
Template Sequence  VKIFGK. LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH. LEIGGRLILMGSITGQAKAVPKHAVYS
Template Known Secondary structure  S
.










GGG

T.S
TT


GGGT
SS
SS
Template Predicted Secondary structure 





.










































.














Template SS confidence 















































































   102..... ..110.........120.........130.........140.........150.. .......160.........170.........
 
   161........170.........180.........190.........200... ......210.........220.........
Predicted Secondary structure 











...........








Query SS confidence 










































. . . . . . . . . . .

























Query Sequence  ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT. . . . . . . . . . . QSDKPVENPGIAARFTLGPEAVVDKV
Query Conservation   

 
       
  
    



  
 

 
 
         ...........                  

 

  
Alig confidence 










































...........

























Template Conservation 


          
       
 

 
 

 
 
                               



   
 


  
Template Sequence  GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV
Template Known Secondary structure  GGGT


BSSGGGGSTT
TT

S
TT
S
B
Template Predicted Secondary structure 
































Template SS confidence 















































































   180.........190.........200.........210.........220.........230.........240.........250.........
 
   230...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  RHAF
Query Conservation    
 
Alig confidence 



Template Conservation    
 
Template Sequence  CFLA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   260...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions