Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence99.95%DateThu Jan 5 11:26:54 GMT 2012
Rank156Aligned Residues198
% Identity22%Templatec3tpcG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:short chain alcohol dehydrogenase-related dehydrogenase; PDBTitle: crystal structure of a hypothtical protein sma1452 from sinorhizobium2 meliloti 1021
Resolution2.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIF
Query Conservation 
 

 










  

  

  
  
    
    
             
                          
Alig confidence 



































...........
































Template Conservation 
 

 






 


 
 
  
   

 

   
 ...........      
                     
    
Template Sequence  LKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLK. . . . . . . . . . . VRFRNADVTNEADATAALAFAKQEFGHVHGLVN
Template Known Secondary structure 
TT
TTTSTT


...........


TT
S


Template Predicted Secondary structure 












...........

























Template SS confidence 















































































   5....10.........20.........30.........40 .........50.........60.........70...
 
   93......100.........110.........120.........130.. .......140.........150.........160...
Predicted Secondary structure 



























.........















Query SS confidence 







































. . . . . . . . .






























Query Sequence  NNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPA. . . . . . . . . MLPHGEGRIVMTSSVMGLISTPGRGAYAASK
Query Conservation                                          .........            

            
  

Alig confidence 







































.........






























Template Conservation                                                                
            
  

Template Sequence  CAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASK
Template Known Secondary structure 








SB
SSSB

TTTS


TTS



T

TT
Template Predicted Secondary structure 




















































Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   164.....170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 






















Query SS confidence 








































































Query Sequence  YALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISE
Query Conservation   
       
  
    



  
 

 
 
                           

 

  
  
    
Alig confidence 



































...............





















Template Conservation   
       

       
 

 
 

 
 
     ...............   
   
 


  
  
 
  
Template Sequence  GGVAALTLPAARELARFGIRVVTIAPGIFDTPASVP. . . . . . . . . . . . . . . FPPRLGRAEEYAALVKHICENT
Template Known Secondary structure  GGGT
SBS



SS...............SS
S
B

T
Template Predicted Secondary structure 














...............





Template SS confidence 








































































   168.170.........180.........190.........200... ......210.........220.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions