Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence99.93%DateThu Jan 5 11:26:54 GMT 2012
Rank182Aligned Residues223
% Identity18%Templatec3t4xA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: short chain dehydrogenase/reductase family oxidoreductase from2 bacillus anthracis str. ames ancestor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50........ .60.........70.........80.......
Predicted Secondary structure 















...























Query SS confidence 















































. . .




























Query Sequence  GKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSM. . . GFTGVLIDLDSPESVDRAADEVIALTDNC
Query Conservation    
 

 










  

  

  
  
    
    
      ...       
                     
Alig confidence 















































...




























Template Conservation   

 


 





 


 


  

  

 


  
           
                               
Template Sequence  XQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK
Template Known Secondary structure 


TT
TT
SSTT
SS
TT


TTS


Template Predicted Secondary structure 



























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  LYGIFNNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALE
Query Conservation                                                           

            
  

 
  
Alig confidence 















































































Template Conservation                                                                                  
Template Sequence  VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQL
Template Known Secondary structure 
S








GGGS
TTT

GGGTS

TT
Template Predicted Secondary structure 














































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   168.170.........180.........190.........200........ .210.........220.........230...
Predicted Secondary structure 













.............






Query SS confidence 








































. . . . . . . . . . . . .
























Query Sequence  AWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKP. . . . . . . . . . . . . VENPGIAARFTLGPEAVVDKVRHAF
Query Conservation       
  
    



  
 

 
 
              .............             

 

  
  
 
Alig confidence 








































.............
























Template Conservation                        
 
 
                                 

 
   
 


  
 

 
Template Sequence  SLSRSLAELTTGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVTFLS
Template Known Secondary structure  TTTS

B

SSTTS



TT
SS
S
B
T
Template Predicted Secondary structure 
































Template SS confidence 














































































   163......170.........180.........190.........200.........210.........220.........230.........240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions