Job Description P0AFP4 Confidence 99.97% Date Thu Jan 5 11:26:54 GMT 2012 Rank 92 Aligned Residues 215 % Identity 19% Template c3sc4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short chain dehydrogenase (a0qtm2 homolog); PDBTitle: crystal structure of a short chain dehydrogenase (a0qtm2 homolog)2 mycobacterium thermoresistibile Resolution 2.50 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	Q	K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	G	K	T	M	F	I	S	G	G	S	R	G	I	G	L	A	I	A	K	R	V	A	A	D	G	A	N	V	A	L	V	A	K	S	A	E	P	H	P	K	L	P	G	T	I	Y	T	A	A	K	E	I	E	E	A	G	G	Q	A	L	P	I	V	G	D	I	R	D	G	D	A	V	A	A	A	V	A	K
Template Known Secondary structure			T	T							S		S	S												T	T	T								S			S			S	S	S															T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	I	A	L	T	D	N	C	L	Y	G	I	F	N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	.
Query Conservation																																																																																	.
Alig confidence									.																																																																								.
Template Conservation									.
Template Sequence		T	V	E	Q	F	G	G	.	I	D	I	C	V	N	N	A	S	A	I	N	L	G	S	I	E	E	V	P	L	K	R	F	D	L	M	N	G	I	Q	V	R	G	T	Y	A	V	S	Q	S	C	I	P	H	M	K	G	R	D	N	P	H	I	L	T	L	S	P	P	I	R	L	E	P	K	W	L	R	P	T	P
Template Known Secondary structure							S		.		S														T	T	T	S																								G	G	G	T	T	T	S	S	S													S	G	G	G	S		S
Template Predicted Secondary structure									.
Template SS confidence
		83	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	A	S	K	Y	A	L	E	A	W	S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V	R	H	A	F	I	S	E
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		Y	M	M	A	K	Y	G	M	T	L	C	A	L	G	I	A	E	E	L	R	D	A	G	I	A	S	N	T	L	W	P	R	T	T	V	A	T	A	A	V	Q	.	.	.	.	.	.	.	.	N	L	L	G	G	D	E	A	M	A	R	S	R	K	P	E	V	Y	A	D	A	A	Y	V	V	L	N	K	P
Template Known Secondary structure																				T	G	G	G	T									S	S		B							.	.	.	.	.	.	.	.				T	S					T	T		B		T												T	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions