Job Description P0AFP4 Confidence 99.98% Date Thu Jan 5 11:26:54 GMT 2012 Rank 56 Aligned Residues 221 % Identity 20% Template c3ijrF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+ Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		T	G	K	V	M	Q	K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	.	.	.	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	K	L	K	G	K	N	V	L	I	T	G	G	D	S	G	I	G	R	A	V	S	I	A	F	A	K	E	G	A	N	I	A	I	A	Y	L	D	E	E	G	D	A	N	E	T	K	Q	Y	V	E	K	E	G	V	K	C	V	L	L	P	G	D	L	S	D	E	Q	H	C	K	D	I	V	Q	E	T	V	R
Template Known Secondary structure			S	T	T	T	T							T	T	T	S													T	T								S	S														T	T	T	S							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	D	N	C	L	Y	G	I	F	N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		Q	L	G	S	L	N	I	L	V	N	N	V	A	Q	Q	Y	P	Q	Q	G	L	E	Y	I	T	A	E	Q	L	E	K	T	F	R	I	N	I	F	S	Y	F	H	V	T	K	A	A	L	S	H	.	.	L	K	Q	G	D	V	I	I	N	T	A	S	I	V	A	Y	E	G	N	E	T	L	I	D	Y	S	A	T
Template Known Secondary structure				S																S	S	G	G	G														T												T	T	.	.			T	T									T							T	T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	A	L	E	A	W	S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V	R	H	A	F
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		K	G	A	I	V	A	F	T	R	S	L	S	Q	S	L	V	Q	K	G	I	R	V	N	G	V	A	P	G	P	I	W	T	P	L	I	P	S	S	F	D	E	K	K	V	S	Q	F	G	S	N	.	V	P	X	Q	R	P	G	Q	P	Y	E	L	A	P	A	Y	V	Y	L	A
Template Known Secondary structure																	G	G	G	T										S	B		S	T	T	T	T	T	T	S						T	T	T	T	T	T	.	S	T	T	S	S		B		G	G	G	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions