Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence100.00%DateThu Jan 5 11:26:54 GMT 2012
Rank48Aligned Residues219
% Identity19%Templatec3gk3D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:acetoacetyl-coa reductase; PDBTitle: crystal structure of acetoacetyl-coa reductase from2 burkholderia pseudomallei 1710b
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80...... ...90..
Predicted Secondary structure 



































.

Query SS confidence 








































































.





Query Sequence  MQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDN. CLYGIF
Query Conservation   

 










  

  

  
  
    
    
             
                    .      
Alig confidence 








































































.





Template Conservation 
 
 






 


 


  
   
  


  
                                              
Template Sequence  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLI
Template Known Secondary structure 


TTTTSTT


T




TT
S

S
Template Predicted Secondary structure 











































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  NNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDA
Query Conservation                                                      

            
  

 
       
Alig confidence 















































































Template Conservation                                                  
   

            
  

 
       
Template Sequence  NNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKT
Template Known Secondary structure 








TTT

TTT




TT
Template Predicted Secondary structure 






















































Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   173......180.........190.........200.........210.........220.........230...
Predicted Secondary structure 




















Query SS confidence 




























































Query Sequence  LRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAF
Query Conservation 
  
    



  
 

 
 
                           

 

  
  
 
Alig confidence 







































.



















Template Conservation 

       
 

 
 

 
 
                  . 
  
   
 


  
  
 
Template Sequence  LALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQ. IPVGRLGRPDEVAALIAFLC
Template Known Secondary structure  SGGGT

B

S
TGGG.
TT
S
B
T
Template Predicted Secondary structure 


















.







Template SS confidence 




























































   168.170.........180.........190.........200....... ..210.........220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions