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Job DescriptionP0AFP4
Confidence99.97%DateThu Jan 5 11:26:54 GMT 2012
Rank97Aligned Residues212
% Identity26%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSM. . . . . . GFTGVLIDLDSPESVDRAADEVIALTD
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Template Sequence  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG
Template Known Secondary structure  TTTT
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SSTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  NCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYA
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Template Sequence  A. LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAG
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GGG

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   84 .....90.........100.........110.........120.........130.........140.........150.........160..
 
   166...170.........180.........190.........200.........210.........220.........230...
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Query Sequence  LEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAF
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Template Sequence  VAGMTRALAREIGSRGITVNCVAPGFIDTDEQQ. . . . . . . . . TALKTQIPLGRLGSPEDIAHAVAFLA
Template Known Secondary structure  GGGT

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   163......170.........180.........190..... ....200.........210.........220.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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