Job Description P0AFP4 Confidence 100.00% Date Thu Jan 5 11:26:54 GMT 2012 Rank 52 Aligned Residues 215 % Identity 22% Template c3emkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: 2.5a crystal structure of glucose/ribitol dehydrogenase2 from brucella melitensis Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		K	V	M	Q	K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D	N	C	L	Y
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		D	L	T	G	R	K	A	L	V	T	G	A	T	G	G	L	G	E	A	I	A	R	A	L	H	A	Q	G	A	I	V	G	L	H	G	T	R	E	E	K	L	K	E	L	A	A	E	L	G	E	R	I	F	V	F	P	A	N	L	S	D	R	E	A	V	K	A	L	G	Q	K	A	E	E	E	M	G	G	V	D
Template Known Secondary structure				T	T						T	T	T	T	S													T	T								S														S	S								T	T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	F	N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A	L	E	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	V	N	N	A	G	I	T	R	D	G	L	F	V	R	M	S	D	E	D	W	D	A	V	L	T	V	N	L	T	S	V	F	N	L	T	R	E	L	T	H	P	M	M	R	R	R	N	G	R	I	I	N	I	T	S	I	V	G	V	T	G	N	P	G	Q	A	N	Y	C	A	S	K	A	G	L	I	G	F
Template Known Secondary structure															G	G	G														T																	T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V	R	H	A	F
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		S	K	S	L	A	Q	E	I	A	S	R	N	V	T	V	N	C	I	A	P	G	F	I	E	S	A	M	E	K	Q	K	.	.	.	.	.	.	.	D	A	I	M	G	N	I	P	M	K	R	M	G	V	G	A	D	I	A	A	A	V	V	Y	L	A
Template Known Secondary structure										G	G	G	T										S	B	S	S							.	.	.	.	.	.	.					T	T		T	T		S		B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions