Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence99.51%DateThu Jan 5 11:26:54 GMT 2012
Rank222Aligned Residues192
% Identity16%Templatec3e8xA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative nad-dependent epimerase/dehydratase; PDBTitle: putative nad-dependent epimerase/dehydratase from bacillus halodurans.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  QKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNN
Query Conservation 

 










  

  

  
  
    
    
             
                            
Alig confidence 








































































.......
Template Conservation 
 



 



 

  

  
   
  
    
                                  
     .......
Template Sequence  GXRVLVVGANGKVARYLLSELKNKGHEPVAXVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAG. . . . . . .
Template Known Secondary structure 

TTTSTT
SSGGGTT
S

TTS

GGGGTT
S


.......
Template Predicted Secondary structure 
































.......
Template SS confidence 















































































   0.........10.........20.........30.........40.........50.........60.........70..
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  AGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALR
Query Conservation                                                    

            
  

 
       
 
Alig confidence  ..............

































































Template Conservation  ..............                                    

                            
Template Sequence  . . . . . . . . . . . . . . SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIXVSSVGTVDPDQGPXNXRHYLVAKRLADDELK
Template Known Secondary structure  ..............

TTS
TTTT



TT
S
GGGS
GGG
Template Predicted Secondary structure  ..............






















Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130........
 
   175....180.........190.........200.........210.........220.........230.......
Predicted Secondary structure 























Query SS confidence 






























































Query Sequence  MELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEK
Query Conservation   
    



  
 

 
 
                           

 

  
  
     
Alig confidence 
....















......



































Template Conservation   ....      
 

  
 
 ......                  
   


      
    
Template Sequence  R. . . . SSLDYTIVRPGPLSNE. . . . . . ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH
Template Known Secondary structure  ....SSS
S
S......


SSS
S




TT
GG
Template Predicted Secondary structure  ....









......



















Template SS confidence 






























































   139 140.........150..... ....160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions