Job Description P0AFP4 Confidence 99.93% Date Thu Jan 5 11:26:54 GMT 2012 Rank 180 Aligned Residues 196 % Identity 14% Template c3d7lG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:lin1944 protein; PDBTitle: the crystal structure of the protein lin1944 from listeria innocua . Resolution 2.06 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D	N	C	L	Y	G	I	F	N	N	A
Query Conservation
Alig confidence																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	L	L	I	G	A	S	G	T	L	G	S	A	V	K	E	R	L	E	K	K	A	.	E	V	I	T	A	G	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	D	V	T	V	D	I	T	N	I	D	S	I	K	K	X	Y	E	Q	V	G	K	V	D	A	I	V	S	A	T
Template Known Secondary structure								T	T	T	S											T	T	T	S	.							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S					T	T
Template Predicted Secondary structure																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.																	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A	L	E	A	W	S	D	A	L	R	M
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		G	S	A	T	F	S	P	L	T	E	L	T	P	E	K	N	A	V	T	I	S	S	K	L	G	G	Q	I	N	L	V	L	L	G	I	D	S	L	.	.	N	D	K	G	S	F	T	L	T	T	G	I	X	X	E	D	P	I	V	Q	G	A	S	A	A	X	A	N	G	A	V	T	A	F	A	K	S	A	A	I
Template Known Secondary structure									G	G	G												T	T	T									T	T	G	G	G		.	.												G	G	G	T	S			T	T																			G	G
Template Predicted Secondary structure																																								.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V	R	H	A	F	I	S	E	K	P	K	M	R	Y
Query Conservation
Alig confidence					.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	X	P	.	R	G	I	R	I	N	T	V	S	P	N	V	L	E	E	S	W	D	K	.	.	.	.	.	.	.	.	.	.	.	L	E	P	F	F	E	G	F	L	P	V	P	A	A	K	V	A	R	A	F	E	K	S	V	F	G	A	Q	T	G	E	S	Y
Template Known Secondary structure		G		S	.	T	T											B	G	G	G				.	.	.	.	.	.	.	.	.	.	.		G	G	G	S	T	T				B															S				S
Template Predicted Secondary structure					.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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