Job Description P0AFP4 Confidence 99.45% Date Thu Jan 5 11:26:54 GMT 2012 Rank 232 Aligned Residues 211 % Identity 19% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		12	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																			.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																			.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	M	Q	K	S	V	L	I	T	G	.	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	.	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	.	.	.	.	.	.	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E
Query Conservation													.																			.																			.	.	.	.	.	.	.	.	.	.
Alig confidence													.																			.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	K	D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F
Template Known Secondary structure				T	T							S			S	S	S												T	T								S	S																			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
		80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																																																					.	.	.	.	.
Query SS confidence								.	.	.	.	.																																																					.	.	.	.	.
Query Sequence		V	I	A	L	T	D	.	.	.	.	.	N	C	L	Y	G	I	F	N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	.	.	.	.	.	E	G	R	I	V	M	T	S	S	V	M	G
Query Conservation								.	.	.	.	.																																																					.	.	.	.	.
Alig confidence								.	.	.	.	.																																																					.	.	.	.	.
Template Conservation
Template Sequence		I	Y	D	T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G
Template Known Secondary structure				S		T	T	T	T	S						S												S	B		G	G	G													T																T	T	T			S											S		T	T
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A	L	E	A	W	S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V
Query Conservation
Alig confidence					.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																										.	.	.	.	.	.	.	.	.
Template Sequence		T	F	G	.	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	.	.	.	.	.	.	.	.	.	N	N	I	I	A	E	G	I	E	K	M	G	V	R	T	F	S	Q	K	E	M	A	F	N	L
Template Known Secondary structure			S	S	.	.		B	T	T								G	G	G								S	S		T	T	T															.	.	.	.	.	.	.	.	.			T	T						T	T	T		B
Template Predicted Secondary structure					.	.																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		832	.	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.										.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900
		230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	L
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		906	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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