Job Description P0AFP4 Confidence 99.97% Date Thu Jan 5 11:26:54 GMT 2012 Rank 104 Aligned Residues 217 % Identity 18% Template c2qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1 Resolution 1.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		K	V	M	Q	K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	.	.	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		P	M	N	G	Q	V	C	V	V	T	G	A	S	R	G	I	G	R	G	I	A	L	Q	L	C	K	A	G	A	T	V	Y	I	T	G	R	H	L	D	T	L	R	V	V	A	Q	E	A	Q	S	L	G	G	Q	C	V	P	V	V	C	D	S	S	Q	E	S	E	V	R	S	L	F	E	Q	V	D	R	E	Q	Q
Template Known Secondary structure		T	T	T	T						S	S	T	T	S													T	T								S																S	S									T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		N	C	L	Y	G	I	F	N	N	A	G	F	G	M	Y	.	.	.	.	.	.	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	L	D	V	L	V	N	N	A	Y	A	G	V	Q	T	I	L	N	T	R	N	K	A	F	W	E	T	P	A	S	M	W	D	D	I	N	N	V	G	L	R	G	H	Y	F	C	S	V	Y	G	A	R	L	M	V	P	A	G	Q	G	L	I	V	V	I	S	S	P	G	S	L	Q	Y	M	F	N	V	P	Y
Template Known Secondary structure		T											T	T							T	T	T			T	T	T	S		T	T							T	T	T	T															G	G	G	T										G	G	G	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.
Query Sequence		A	A	S	K	Y	A	L	E	A	W	S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	.	.	.	.	.	.	.	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K
Query Conservation																																																					.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	K	A	A	C	D	K	L	A	A	D	C	A	H	E	L	R	R	H	G	V	S	C	V	S	L	W	P	G	I	V	Q	T	E	L	L	S	S	A	E	T	T	E	L	S	G	K	C	V	V	A	L	A	T	D	P	N	I	L	S	L	S	G	K	V	L	P	S	C	D	L	A	R	R
Template Known Secondary structure																				G	G	G	T											S		T	T	T																			T		T	T	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions