Job Description P0AFP4 Confidence 99.31% Date Thu Jan 5 11:26:54 GMT 2012 Rank 256 Aligned Residues 232 % Identity 13% Template c2q1wC_ PDB info PDB header:sugar binding protein Chain: C: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmh in2 complex with nad+ Resolution 2.19 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D	N	C	L	Y	G	I	F	N
Query Conservation																																													.	.
Alig confidence																																													.	.																						.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		K	K	V	F	I	T	G	I	C	G	Q	I	G	S	H	I	A	E	L	L	L	E	R	G	D	K	V	V	G	I	D	N	F	A	T	G	R	R	E	H	L	K	D	H	P	N	L	T	F	V	E	G	S	I	A	D	H	A	L	V	N	Q	L	I	G	D	.	.	.	.	.	.	.	.	L	Q	P	D	A	V
Template Known Secondary structure								T	T	T	S													T	T										S	S			G	G	G	S				T	T								T	T												.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A	L	E	A	W	S	D	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	T	A	A	S	Y	K	D	P	D	D	W	Y	N	D	T	L	T	N	C	V	G	G	S	N	V	V	Q	A	A	K	K	N	N	V	G	R	F	V	Y	F	Q	T	A	L	C	Y	G	V	K	P	I	Q	Q	P	V	R	L	D	H	P	R	N	P	A	N	S	S	Y	A	I	S	K	S	A	N	E	D	Y
Template Known Secondary structure									S		T	T										T													T	T		S								G	G	G	G		S	S		S	S	S	S	B		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	.	.	.	.	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V	R	H	A	F	I	S	E	K	P	K	M	R	Y	P	V	T	L	V	T	W
Query Conservation																								.	.	.	.
Alig confidence						.	.	.																.	.	.	.
Template Conservation						.	.	.
Template Sequence		L	E	Y	S	.	.	.	G	L	D	F	V	T	F	R	L	A	N	V	V	G	P	R	N	S	G	P	L	P	I	F	F	Q	R	L	S	E	G	K	K	C	F	V	T	K	A	R	R	D	F	V	F	V	K	D	L	A	R	A	T	V	R	A	V	D	G	V	G	H	G	A	Y	H	F	S	S	G	T	D	V
Template Known Secondary structure						.	.	.										S				S	T	T														T	T							S																				T	T									S		S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		154	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M	V	L	K	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	K	E	L	Y	D	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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