Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP4
Confidence95.86%DateThu Jan 5 11:26:54 GMT 2012
Rank493Aligned Residues92
% Identity13%Templatec2omeA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:c-terminal-binding protein 2; PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50. ........60.........70....
Predicted Secondary structure 















.............











Query SS confidence 











































. . . . . . . . . . . . .






















Query Sequence  ILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDD. . . . . . . . . . . . . VERMNSMGFTGVLIDLDSPESVD
Query Conservation   
   
 

 










  

  

  
  
    
    .............
             
        
Alig confidence 















.


























.............






















Template Conservation       
 
 





 .
 

  

  
 


  
                      
  

   


 
  


  
  
Template Sequence  SGAARIRGETLGLIGF. GRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHH
Template Known Secondary structure  TT



TT


.SGGGT

TTS
TTTT

SS
S




TT
TT
Template Predicted Secondary structure 










.

























Template SS confidence 















































































   173......180........ .190.........200.........210.........220.........230.........240.........250.
 
   75....80.........90.........100
Predicted Secondary structure 





















Query SS confidence 

























Query Sequence  RAADEVIALTDNCLYGIFNNAGFGMY
Query Conservation                            
Alig confidence 

























Template Conservation 

    
  

 

 


 


 


Template Sequence  LINDFTIKQMRQGAFLVNAARGGLVD
Template Known Secondary structure  SB
TTS
TT
S
GGGB
Template Predicted Secondary structure 















Template SS confidence 

























   252.......260.........270.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions