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Job DescriptionP0AFP4
Confidence99.72%DateThu Jan 5 11:26:54 GMT 2012
Rank208Aligned Residues214
% Identity13%Templatec2gn9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30........ .40.........50....... ..60.........70.........80......
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Query Sequence  VMQKSVLITGCSSGIGLESALELKRQ. . GFHVLAGCRKPDDVERMNS. . . . MGFTGVLIDLDSPESVDRAADEVIALTDN
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Template Sequence  LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLN. . . . . . . . YALE
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BS
TTTSSB
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   8.10.........20.........30.........40.........50.........60.........70..... ....
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  CLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYAL
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Template Sequence  GVDICIHAAALKHVPIAEYNPLECIKTNIMGASN. . . . . . . . VINACLKNAISQVIALSTDKAANP. . . INLYGATKLCS
Template Known Secondary structure  T
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   80.........90.........100.........110... ......120.........130....... ..140........
 
   167..170.........180.........190... ......200.........210.........220.........230.........240
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Query Sequence  EAWSDALRMELRHSGIKVSLIEPGPIR. . . . . . TRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEKPKM
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Template Sequence  DKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGE
Template Known Secondary structure  GGG

SSS




SS
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   241....
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Query Sequence  RYPVT
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Template Sequence  IFVPK
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   229230...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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