Job Description P0AFP4 Confidence 99.79% Date Thu Jan 5 11:26:54 GMT 2012 Rank 200 Aligned Residues 217 % Identity 16% Template c2dknA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-alpha-hydroxysteroid dehydrogenase; PDBTitle: crystal structure of the 3-alpha-hydroxysteroid dehydrogenase from2 pseudomonas sp. b-0831 complexed with nadh Resolution 1.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.
Query Sequence		S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	.	.	.	.	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D	N	C	L
Query Conservation																																												.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	A	I	T	G	S	A	S	G	I	G	A	A	L	K	E	L	L	A	R	A	G	H	T	V	I	G	I	D	R	G	Q	A	D	I	E	A	D	L	S	T	P	G	G	R	E	T	A	V	A	A	V	L	D	R	C	G	G	V	L	D	G	L	V	C	C	A	G	V	G	V	T	A	A	N	S	G	L	V
Template Known Secondary structure							T	T	T	S													T	T								S	S	S	S	S					T	T	S																T	T			S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	I	F	N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A	L	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	V	N	Y	F	G	V	S	A	L	L	D	G	L	A	E	A	L	S	R	G	Q	Q	P	A	A	V	I	V	G	S	I	A	A	T	Q	P	G	A	A	E	L	P	M	V	E	A	M	L	A	G	D	E	A	R	A	I	E	L	A	E	Q	Q	G	Q	T	H	L	A	Y	A	G	S	K	Y	A	V	T	C
Template Known Secondary structure						T																T	S	S	S									G	G	G	G	S	T	T	G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		W	S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	.	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V	R	H	A	F
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		L	A	R	R	N	V	V	D	W	A	G	R	G	V	R	L	N	V	V	A	P	G	A	V	E	T	P	L	L	Q	A	S	K	A	D	P	R	Y	G	E	S	T	R	R	F	V	A	P	L	G	R	G	S	E	P	R	E	V	A	E	A	I	A	F	L	L
Template Known Secondary structure						T							T	T											B		S										T	T	T						S				T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions