Job Description P0AFP4 Confidence 96.50% Date Thu Jan 5 11:26:54 GMT 2012 Rank 439 Aligned Residues 204 % Identity 10% Template c2d3tB_ PDB info PDB header:lyase, oxidoreductase/transferase Chain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v Resolution 3.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	V	L	I	T	G	C	S	S	G	I	G	L	E	S	A	L	E	L	K	R	Q	G	F	H	V	L	A	G	C	R	K	P	D	D	V	E	R	M	N	S	M	.	.	.	.	.	.	.	.	.	.	G	F	T	G	V	L	I	D	L	D	S	P	E	S	V	D	R	A	A	D	E	V	I	A	L	T	D
Query Conservation																																													.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		K	Q	A	A	V	L	G	A	.	G	I	M	G	G	G	I	A	Y	Q	S	A	S	K	G	T	P	I	L	M	K	D	I	N	E	H	G	I	E	Q	G	L	A	E	A	A	K	L	L	V	G	R	V	D	K	G	R	M	T	P	A	K	M	A	E	V	L	N	G	I	R	P	T	L	S	Y	G	D	F	G	N
Template Known Secondary structure		S	S							.	T	T												T	T								S	S																				T	T	T	S	S																S	S	G	G	G	G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		315	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	L	Y	G	I	F	N	N	A	G	F	G	M	Y	G	P	L	S	T	I	S	R	A	Q	M	E	Q	Q	F	S	A	N	F	F	G	A	H	Q	L	T	M	R	L	L	P	A	M	L	P	H	G	E	G	R	I	V	M	T	S	S	V	M	G	L	I	S	T	P	G	R	G	A	Y	A	A	S	K	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	V	V	E	A	V	V	E	N	P	K	V	K	Q	A	V	L	A	E	V	E	N	H	V	R	E	D	A	I	L	A	S	N	T	S	T	I	S	I	S	L	L	A	K	A	L	K	R	P	E	N	F	V	G	M	H	F	F	N	P	V	H	M	M	P	L	V	E	V	I	R	G	E	K	S	S	D	L
Template Known Secondary structure			S								S													T	T	T	S		S	S								S	S	S						T	T	T	S	S		G	G	G								S	S	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	W	S	D	A	L	R	M	E	L	R	H	S	G	I	K	V	S	L	I	E	P	G	P	I	R	T	R	F	T	D	N	V	N	Q	T	Q	S	D	K	P	V	E	N	P	G	I	A	A	R	F	T	L	G	P	E	A	V	V	D	K	V
Query Conservation
Alig confidence																						.																									.	.	.	.	.	.	.	.
Template Conservation																						.																									.	.	.	.	.	.	.	.
Template Sequence		A	V	A	T	T	V	A	Y	A	K	K	M	G	K	N	P	I	V	V	N	.	D	C	P	G	F	L	V	N	R	V	L	F	P	Y	F	G	G	F	A	K	L	V	S	A	.	.	.	.	.	.	.	.	G	V	D	F	V	R	I	D	K	V	M
Template Known Secondary structure													T	T								.			T	T	T	T																		T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																						.																									.	.	.	.	.	.	.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.		.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.									.	.	520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions