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Job DescriptionQ57049
Confidence0.66%DateThu Jan 5 12:37:12 GMT 2012
Rank95Aligned Residues10
% Identity20%Templatec1no7A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:major capsid protein; PDBTitle: structure of the large protease resistant upper domain of2 vp5, the major capsid protein of herpes simplex virus-1
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40..
Predicted Secondary structure 




Query SS confidence 









Query Sequence  FPAFFSDPTV
Query Conservation 









Alig confidence 









Template Conservation 

 




  
Template Sequence  VHALFAGADH
Template Known Secondary structure  SBTTBB
Template Predicted Secondary structure 




Template SS confidence 









   960.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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