|   |
1 | . | . | . | . | . | . | |
|
|
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | E | I | V | I | R | . |
. |
. |
H | A | E | T | R | D | Y | E | A | I | R | Q | I | H | A | Q | P | E | V | Y | C | N | T | L | Q | V | P | H | P | S | D | H | M | W | Q | E | R | L | A | D | R | P | G | I | K | Q | L | V | A | C | I | D | G | D | V | V | G | H | L | T | I | D | V | Q | Q | R | P | R | R | S |
Query Conservation |   |
|   |   |
|   |
|
| . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . |   |   |
|
|   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | D | . |
W | T | C | K | H | H | A | D | L | T | L | K | E | L | Y | A | L | L | Q | L | R | T | E | V | F | V | V | E | Q | K | C | P | Y | Q | E | V | D | . |
. |
. |
. |
. |
. |
G | L | D | L | V | G | D | T | H | H | L | X | A | W | R | D | G | Q | L | L | A | Y | L | R | L | L | D | P | V | R | H | E | G | Q |
Template Known Secondary structure |   |
|  | . |  |  |  |  |  | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
|
|
|
| S |
|
| . | . | . | . | . | . | S |
| T | T | S | T | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S | T | T | T | T | T |
|
Template Predicted Secondary structure |   |
|  | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | |
. | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | A | D | F | G | I | C | V | D | S | R | W | K | N | R | G | V | A | S | A | L | M | R | E | M | I | E | M | C | D | N | W | L | R | V | D | R | I | E | L | T | V | F | V | D | N | A | P | A | I | K | V | Y | K | K | Y | G | F | E | I | E | G | T | G | K | K | Y | A | L | R | N | G | E | Y | V | D | A | Y | Y |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |   |
|   | . |   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   | . | . | . |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
| . | . | . |
|   |   |   |   |   |
|
|   |
| . | . |   |   |
Template Sequence |   |
V | V | I | G | . |
R | V | V | S | S | S | A | A | R | G | Q | G | L | G | H | Q | L | X | E | R | A | L | Q | A | A | E | R | L | W | L | D | T | P | V | Y | L | S | A | . |
. |
. |
Q | A | H | L | Q | A | Y | Y | G | R | Y | G | F | V | A | V | T | . |
. |
. |
E | V | Y | L | E | D | D | I | P | H | . |
. |
I | G |
Template Known Secondary structure |   |
 |  |  |  | . |  |  |  |  |
| G | G | G | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | . | . | . |  | S | T | T |  |  |  |  |  | T | T | T |  |  |  |
| S | . | . | . |
|
|  |  |  | T | T |  |  |  | . | . |  |  |
Template Predicted Secondary structure |   |
 |  |  |  | . |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
| . | . | . |
|
|  |  |  |
|
|
|
|
| . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
. | . | . | . | . | 140 | . | . | . | . | |
|
. | . |
  |
  |   |
158 | . | 160 |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
M | A | R |
Query Conservation |   |
|   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
X | R | R |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
|
|
|
Template SS confidence |   |
|
|
|
  |   |
147 | . | . |
  |