Return to main results Retrieve Phyre Job Id

Job DescriptionP46854
Confidence99.74%DateWed Jan 25 15:20:56 GMT 2012
Rank76Aligned Residues155
% Identity16%Templatec2reeB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70..
Predicted Secondary structure 



























.........
Query SS confidence 






































































. . . . . . . . .
Query Sequence  SEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQ. . . . . . . . .
Query Conservation    
 

     
   
  
                                  
                 .........
Alig confidence 























......








































.........
Template Conservation 
 
 

 
   

  
  
    
......              
                 
                 
Template Sequence  NYYNLRHPKIEDLRDLIALETLCW. . . . . . SENLQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKT
Template Known Secondary structure 




GGGS......
TTT



GGG
TTS
GGGGTT

Template Predicted Secondary structure 






......
























Template SS confidence 















































































   226...230.........240......... 250.........260.........270.........280.........290.........
 
   73......80.........90.........100.........110.........120....
Predicted Secondary structure  ........

















....................
Query SS confidence  . . . . . . . .



















































. . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . RPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDN. . . . . . . . . . . . . . . . . . . .
Query Conservation  ........           
 
     
 
 
  
                
       
....................
Alig confidence  ........



















































....................
Template Conservation                  
  
 
 
  

 


  

   
  
    
   
   

  
           
       
Template Sequence  CTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESG
Template Known Secondary structure  TTTGGGG

TT
S
TTSTTSSTTSTT



SSGGGGTTS
TT
B
TTS
Template Predicted Secondary structure 



































Template SS confidence 















































































   300.........310.........320.........330.........340.........350.........360.........370.........
 
   125....130.........140...... ...150.........160..
Predicted Secondary structure  ...




...



Query SS confidence  . . .





















. . .















Query Sequence  . . . APAIKVYKKYGFEIEGTGKKYA. . . LRNGEYVDAYYMARVK
Query Conservation  ...  
  

 
 

   
      ...   
   
   
  
 
Alig confidence  ...





















...















Template Conservation     

 
 
    

        
   
        
       
Template Sequence  LLVDPLLRFHQIHGAKIEKLLPGYRPKDWENQTCGVLVSYDIQH
Template Known Secondary structure 
BSSTT
TTS
TT
GGGTT


TT
Template Predicted Secondary structure 






















Template SS confidence 











































   380.........390.........400.........410.........420...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions