 |
Job Description | P0ABZ4 | Confidence | 57.47% | Date | Thu Jan 5 11:16:45 GMT 2012 |
Rank | 168 | Aligned Residues | 58 |
% Identity | 10% | Template | c2xrzA_ |
PDB info |
PDB header:lyase/dna | Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase; |
PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion
|
Resolution | 2.20 Å |
|
 |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | C | A | L | T | S | D | I | E | V | A | I | I | T | G | R | K | A | K | L | V | E | D | R | C | A | T | L | G | I | T | H | L | Y | Q | G | Q | . |
. |
. |
S | N | K | L | I | A | F | S | D | L | L | E | K | L | A | I | A | P | E | N | V |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   | . | . | . |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | S | L | S | R | K | K | I | P | S | F | F | L | R | G | D | P | G | E | K | I | S | R | F | V | K | D | Y | N | A | G | T | L | V | T | D | F | S | P | L | R | I | K | N | Q | W | I | E | K | V | I | S | G | I | S | I | P | F | F | E | V |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|