Job Description P0ABZ4 Confidence 41.89% Date Thu Jan 5 11:16:45 GMT 2012 Rank 177 Aligned Residues 67 % Identity 7% Template c2j4dA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:cryptochrome dash; PDBTitle: cryptochrome 3 from arabidopsis thaliana Resolution 1.9 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		R	C	A	L	T	S	D	I	E	V	A	I	I	T	G	R	K	A	K	L	V	E	D	R	C	A	T	L	G	I	T	H	L	Y	Q	G	Q	.	.	.	.	.	.	S	N	K	L	I	A	F	S	D	L	L	E	K	L	A	I	A	P	E	N	V	A	Y	V	G	D	D	L	I	D
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	L	M	K	R	G	L	N	L	L	I	R	S	G	K	P	E	E	I	L	P	S	L	A	K	D	F	G	A	R	T	V	F	A	H	K	E	T	C	S	E	E	V	D	V	E	R	L	V	N	Q	G	L	K	R	V	G	N	S	T	K	L	E	L	I	W	G	S	T	M	Y	H
Template Known Secondary structure							T	T								S														T		S									S																T	T		S	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions