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Job DescriptionP0ABZ4
Confidence99.13%DateThu Jan 5 11:16:45 GMT 2012
Rank104Aligned Residues131
% Identity28%Templatec1zjjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100
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Query Sequence  IRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQS. . . . .
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Template Sequence  MVAIIFDMDGVLYRG. . . . . . . . . . . NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITS
Template Known Secondary structure 

BTTTT...........T
TTT

S

SS
TTT



GGG
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   1........10..... ....20.........30.........40.........50.........60.........
 
  
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Query Conservation  ................................................................................
Template Conservation                                                                                 
Template Sequence  GLATRLYMSKHLDPGKIFVIGGEGLVKEMQALGWGIVTLDEARQGSWKEVKHVVVGLDPDLTYEKLKYATLAIRNGATFI
Template Known Secondary structure  S



S
TS
B

TTGGGG




TT

TT
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   70.........80.........90.........100.........110.........120.........130.........140.........
 
   101........110.........120...... ...130.........140..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKLIAFSDLLEKLAIAPENVAYVGDD. LIDWPVMEKVGLSVAV.
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Template Sequence  GTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREMFPGEELWMVGDRLDTDIAFAKKFGMKAIMV
Template Known Secondary structure  S


STT





STTSSTT
S
TTTTT
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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   143......150.. .......160.........170...
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Query Sequence  . . ADAHPLLIPR. . . . ADYVTRIAGGRGAVREVCDLL
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Template Sequence  LTGVSSLEDIKKSEYKPDLVLPS. . . . . . VYELIDYL
Template Known Secondary structure  SSSS

TT
SS

SSS......GGGGGGGG
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   230.........240.........250.. .......260
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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