 |
Job Description | P0A8W8 | Confidence | 3.27% | Date | Thu Jan 5 11:08:52 GMT 2012 |
Rank | 60 | Aligned Residues | 39 |
% Identity | 10% | Template | c2dqlA_ |
PDB info |
PDB header:circadian clock protein | Chain: A: PDB Molecule:pex protein; |
PDBTitle: crytal structure of the circadian clock associated protein2 pex from anabaena
|
Resolution | 1.70 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | |
|
|
|
|
|
|
. | . | . | . | . | . | |
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | M | T | N | A | Q | R | L | I | . |
. |
. |
. |
. |
. |
. |
L | S | N | Q | Y | K | . |
. |
. |
M | M | T | M | L | D | P | A | N | A | E | R | Y | R | R | L | Q | T | I | I | E | R | G |
Query Conservation |   |
|   |
|
|   |   |
|
|
|   | . | . | . | . | . | . | . |
|   |
|
|   |   | . | . | . |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
M | K | I | E | D | I | Y | Q | F | F | E | N | P | P | P | T | Y | L | C | Q | E | V | A | I | C | Y | I | L | Y | V | L | L | Q | G | E | S | Y | G | T | E | L | I | Q | Q | L | E | T | E | H |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|