Return to main results Retrieve Phyre Job Id

Job DescriptionP24182
Confidence99.74%DateThu Jan 5 11:41:00 GMT 2012
Rank78Aligned Residues199
% Identity12%Templated1pk8a2
SCOP infoATP-grasp Glutathione synthetase ATP-binding domain-like Synapsin C-terminal domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110...... ...120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 


.




























Query SS confidence 











.


































































Query Sequence  PKAETIRLMGDK. VSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSIS
Query Conservation 
         

.          


 
                       
 



  
 
  

  
    

     
Alig confidence 











.


































































Template Conservation 

  

  
 

      
            
           
       





  
  
 

  
    

     
Template Sequence  NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIAS
Template Known Secondary structure 

TSS
TTTS
B


SSGGG



SSSSSS

TTTT
S
Template Predicted Secondary structure 































Template SS confidence 















































































   214.....220.........230.........240.........250.........260.........270.........280.........290...
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  MTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKA
Query Conservation   
            




 
 
          

                         
   
       
   
   
Alig confidence 




......



















































.......









Template Conservation       ......    
 
  
    
 

 

                               .......          
Template Sequence  VVALT. . . . . . KTYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMS. . . . . . . DRYKLWVDTC
Template Known Secondary structure  ......TS



TTSSS
SSTTSS



.......
Template Predicted Secondary structure 
......























.......
Template SS confidence 















































































   294.... .300.........310.........320.........330.........340.........350 .........360
 
   264.....270.........280 .........290 .........300.........310......
Predicted Secondary structure 





.



...









Query SS confidence 
















.









. . .

























Query Sequence  CVDIGYRGAGTFEFLFE. NGEFYFIEMN. . . TRIQVEHPVTEMITGVDLIKEQLRIA
Query Conservation     

  
   


   .     




...


 
         



       
Alig confidence 
















.









...

























Template Conservation      
      

 
   

  





                 
 


       
Template Sequence  SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMTQA
Template Known Secondary structure  TTGGG

STTS

TT



TT


Template Predicted Secondary structure 


























Template SS confidence 
























































   361........370.........380.........390.........400.........410.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions