 |
Job Description | P24182 | Confidence | 95.05% | Date | Thu Jan 5 11:41:00 GMT 2012 |
Rank | 162 | Aligned Residues | 92 |
% Identity | 15% | Template | d1id1a_ |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Potassium channel NAD-binding domain
|
Resolution | 2.40 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | L | D | K | I | V | I | A | N | R | G | E | I | A | L | R | I | L | R | A | C | K | E | L | G | I | K | T | V | A | V | H | S | S | A | D | R | . |
. |
. |
D | L | K | H | V | L | L | A | D | E | T | V | C | I | G | P | A | P | S | V | K | S | Y | L | N | I | P | A | I | I | S | A | A | E | I | T | G | A | V | A |
Query Conservation |   |
  |   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|   | . | . | . |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
R | K | D | H | F | I | V | C | G | H | S | I | L | A | I | N | T | I | L | Q | L | N | Q | R | G | Q | N | V | T | V | I | S | N | L | P | E | D | D | I | K | Q | L | E | Q | R | L | G | D | N | A | D | V | I | P | G | D | S | N | D | S | . |
. |
. |
. |
. |
. |
. |
S | V | L | K | K | A | G | I | D | R | C | R | A |
Template Known Secondary structure |   |
|
| S |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  | S |
| T | T | S |  | . | . | . | . | . | . | . |  |  |  |  |  |  | T | T | T | T |
| S |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | P | G | Y | G | F | L | S | E | N | A | N | F | A | E | Q | V | E | R | S | G |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
I | L | A | L | S | D | N | D | A | D | N | A | F | V | V | L | S | A | K | D | M | S |
Template Known Secondary structure |   |
 |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|