Return to main results Retrieve Phyre Job Id

Job DescriptionP24182
Confidence99.73%DateThu Jan 5 11:41:00 GMT 2012
Rank79Aligned Residues200
% Identity12%Templated1i7na2
SCOP infoATP-grasp Glutathione synthetase ATP-binding domain-like Synapsin C-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110......... 120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 


.




























Query SS confidence 














.































































Query Sequence  PKAETIRLMGDKVSA. IAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSIS
Query Conservation 
         

   .       


 
                       
 



  
 
  

  
    

     
Alig confidence 














.































































Template Conservation 
   

    

      
            
                   





  
  
 

  
    

     
Template Sequence  NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIAS
Template Known Secondary structure 

TSS
TTTS
B


SSGGGGSS


SSSS
STTTT
S
Template Predicted Secondary structure 

































Template SS confidence 















































































   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  MTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKA
Query Conservation   
            




 
 
          

                         
   
       
   
   
Alig confidence 




......



















































.......









Template Conservation       ......   
  
  
    



 


                              .......          
Template Sequence  VVALT. . . . . . QTYATAEPFIDAKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMS. . . . . . . DRYKLWVDAC
Template Known Secondary structure  ......T




TTSS
TTTS
S


SS


.......
Template Predicted Secondary structure 
......


























.......
Template SS confidence 















































































   295.... 300.........310.........320.........330.........340.........350. ........360.
 
   264.....270.........280 .........290 .........300.........310.......
Predicted Secondary structure 





.



...










Query SS confidence 
















.









. . .


























Query Sequence  CVDIGYRGAGTFEFLFE. NGEFYFIEMN. . . TRIQVEHPVTEMITGVDLIKEQLRIAA
Query Conservation     

  
   


   .     




...


 
         



       
 
Alig confidence 
















.









...


























Template Conservation      
     


 
   

  





                 
 


   
    
Template Sequence  SEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKMNQLL
Template Known Secondary structure  TTGGG

STTS

TT



SS

Template Predicted Secondary structure 
























Template SS confidence 

























































   362.......370.........380.........390.........400.........410.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions