Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 22 Aligned Residues 375 % Identity 17% Template c3uvzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G	Y
Query Conservation
Alig confidence																															.	.																			.	.	.	.	.	.	.															.	.							.	.
Template Conservation																															.	.																			.	.	.	.	.	.	.															.	.							.	.
Template Sequence		A	W	L	G	M	V	G	G	G	Q	L	G	R	M	F	C	F	A	A	Q	S	M	G	Y	R	V	A	V	L	.	.	D	P	D	P	A	S	P	A	G	A	V	A	D	R	H	L	R	A	.	.	.	.	.	.	.	A	Y	D	D	E	A	A	L	A	E	L	A	G	L	.	.	C	E	A	V	S	T	.	.
Template Known Secondary structure										S													T	T							.	.		S		T	T		T	T	T	T	T	S	S					S	.	.	.	.	.	.	.		T	T												.	.		S					.	.
Template Predicted Secondary structure																															.	.																			.	.	.	.	.	.	.															.	.							.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.								.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S	G
Query Conservation
Alig confidence		.	.																																																																		.	.	.	.
Template Conservation		.	.																																																																		.	.	.	.
Template Sequence		.	.	E	F	E	N	V	P	A	A	S	L	D	F	L	A	R	T	T	F	V	A	P	A	G	R	C	V	A	V	A	Q	D	R	I	A	E	K	R	F	I	E	A	S	G	V	P	V	A	P	H	V	V	I	E	S	A	A	A	L	A	A	L	D	D	A	A	.	.	.	.	L	D	A	V	L	P	G	I	L
Template Known Secondary structure		.	.	S		T	T	S										T	T	S			S	S										S											T	T			B		S						S						T						.	.	.	.			T	T		S
Template Predicted Secondary structure		.	.																																																																		.	.	.	.
Template SS confidence
				82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	M	Q	R	R	H	Q	K	V	V	E	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																																				.
Template Conservation																									.	.	.	.	.	.	.	.																																				.
Template Sequence		K	T	A	R	K	G	Q	V	R	V	S	T	A	R	E	A	R	D	A	H	A	A	L	.	.	.	.	.	.	.	.	G	G	V	P	C	V	L	E	K	R	L	P	L	K	Y	E	V	S	A	L	I	A	R	G	A	D	G	R	S	A	A	F	P	L	A	.	Q	N	V	H	H	N	G	I	L	A	L	T	I
Template Known Secondary structure													S											T	.	.	.	.	.	.	.	.	T	T																							T	T	S									.						T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																																				.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	.	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	I	T	G	V	D	L	I	K	E	Q	L	R	I	A	A	G	Q	P	L
Query Conservation																																								.
Alig confidence																																								.
Template Conservation
Template Sequence		V	P	A	P	A	A	D	T	A	R	V	E	E	A	Q	Q	A	A	V	R	I	A	D	T	L	G	Y	V	G	V	L	C	V	E	F	F	V	L	E	D	G	S	F	V	A	N	E	M	A	P	R	P	H	N	S	G	H	Y	T	V	D	A	C	A	T	S	Q	F	E	Q	Q	V	R	A	M	T	R	M	P	L
Template Known Secondary structure			S		S	S																					T													T	T	S									S	S			G	G	G	T	T					B	S	S												T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	.	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C	Y	G	E	N	R	D	V	A	I	A
Query Conservation																		.
Alig confidence																		.																									.	.	.	.	.														.	.
Template Conservation																																											.	.	.	.	.														.	.
Template Sequence		G	N	P	R	Q	H	S	P	A	A	M	L	N	I	L	G	D	V	W	F	P	N	G	A	A	A	G	A	V	T	P	P	W	D	T	V	A	A	M	P	A	.	.	.	.	.	A	H	L	H	L	Y	G	K	E	E	A	R	V	.	.	G	R	K	M	G	H	V	N	F	T	A	E	M	R	D	D	A	V	A
Template Known Secondary structure						B		S									G	G	G	G		T	T		T	T	S													S	T	T	.	.	.	.	.									S				T	.	.	T											S	S
Template Predicted Secondary structure																																											.	.	.	.	.														.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.						.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	K	N	A	L	Q	E	L	I	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	A	C	A	Q	L	L	R	V	P
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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