Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 7 Aligned Residues 433 % Identity 49% Template c3u9sE_ PDB info PDB header:ligase Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex Resolution 3.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	R	L	L	V	A	N	R	G	E	I	A	C	R	V	M	R	S	A	R	A	L	G	I	G	S	V	A	V	H	S	D	I	D	R	H	A	R	H	V	A	E	A	D	I	A	V	D	L	G	G	A	K	P	A	D	S	Y	L	R	G	D	R	I	I	A	A	A	L	A	S	G	A	Q	A	I	H	P	G
Template Known Secondary structure			S																					T	T									S	T	T	S	S		S	T	T	T	S	S	S								S	S	S	T	T	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S
Query Conservation
Alig confidence																																																						.																											.
Template Conservation																																																						.																											.
Template Sequence		Y	G	F	L	S	E	N	A	D	F	A	R	A	C	E	E	A	G	L	L	F	L	G	P	P	A	A	A	I	D	A	M	G	S	K	S	A	A	K	A	L	M	E	E	A	G	V	P	L	V	P	G	.	Y	H	G	E	A	Q	D	L	E	T	F	R	R	E	A	G	R	I	G	Y	P	V	L	L	K	A	.
Template Known Secondary structure		S	S	T	T	S	S		T								T	T	T				S	S	S								T	T	S										T	T	T							.			S	S				T	T								T	T		S							.
Template Predicted Secondary structure																																																						.																											.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	M	Q	R	R	H	Q	K	V	V	E
Query Conservation
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	A	M	K	V	V	E	R	E	A	E	L	A	E	A	L	S	.	.	.	.	.	.	.	.	S	A	Q	R	A	R	M	L	V	E	K	Y	L	L	K	P	R	H	V	E	I	Q	V	F	A	D	R	H	G	H	C	L	Y	L	N	E	R	D	C	S	I	Q	R	R	H	Q	K	V	V	E
Template Known Secondary structure		.	.	.	.	.								S	S	G	G	G	T					.	.	.	.	.	.	.	.	S													S	S		B										T	T	S													B	S	S	S	S	B
Template Predicted Secondary structure		.	.	.	.	.																		.	.	.	.	.	.	.	.
Template SS confidence
							207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	.	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	I	T	G	V	D	L	I	K	E	Q	L	R	I	A	A	G	Q	P
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		E	A	P	A	P	G	L	G	A	E	L	R	R	A	M	G	E	A	A	V	R	A	A	Q	A	I	G	Y	V	G	A	G	T	V	E	F	L	L	D	E	R	G	Q	F	F	F	M	E	M	N	T	R	L	Q	V	E	H	P	V	T	E	A	I	T	G	L	D	L	V	A	W	Q	I	R	V	A	R	G	E	A
Template Known Secondary structure				S		S	S																				T	T			S								B		T	T	S									S	S			T	T									T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																	.
Query SS confidence																										.																	.
Query Sequence		L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	.	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	.	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C	Y	G	E	N	R	D	V	A
Query Conservation																										.																	.
Alig confidence																										.																	.
Template Conservation
Template Sequence		L	P	L	T	Q	E	Q	V	P	L	N	G	H	A	I	E	V	R	L	Y	A	E	D	P	E	G	D	F	L	P	A	S	G	R	L	M	L	Y	R	E	A	A	A	G	P	G	R	R	V	D	S	G	V	R	E	G	D	E	V	S	P	F	Y	D	P	M	L	A	K	L	I	A	W	G	E	T	R	E	E	A
Template Known Secondary structure			S	S		G	G	G					S									S	S		T	T	T	T	S						B		S								B	T	T									T	T		B			S	S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	M	K	N	A	L	Q	E	L	I	I	D	G	I	K	T	N	V	D	L	Q	I	R	I	M	N	D	E	N	F	Q	H	G	G	T	N	I	H	Y	L	E	K	K	L	G	L	Q	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	R	L	L	A	M	L	A	E	T	S	V	G	G	L	R	T	N	L	A	F	L	R	R	I	L	G	H	P	A	F	A	A	A	E	L	D	T	G	F	I	A	R	H	Q	D	D	L	L	P
Template Known Secondary structure																S	S			T									S	S					T	T			S	T	T					T					S
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.