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Job DescriptionP24182
Confidence97.51%DateThu Jan 5 11:41:00 GMT 2012
Rank95Aligned Residues171
% Identity19%Templatec3tinA_
PDB info PDB header:ligaseChain: A: PDB Molecule:ttl protein; PDBTitle: tubulin tyrosine ligase
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120..... ....130.........140.........150 .........160.........170.........180.
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Query Sequence  RLMGDKVSAIAAMKK. . . . . AGVPCVPGSDGPLGDDMDKNRAIAK. . . . RIGYPVIIKASGGGGGRGMRVVRGDAELAQS
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Template Sequence  DKLCRKASLVKLIKTSPELTETCTWFPESYVIYPEREEFRSSFNKKKENEEGNVWIAKS. . . . SSGGILISSDATELLDF
Template Known Secondary structure  S
TT

SS






TTTS


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S
TTT
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   6970.........80.........90.........100.........110.........120....... ..130.........140....
 
   182.......190.........200..... ....210... ......220.........230.........240....
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Query Sequence  ISMTRAEAKAAFSNDMVYMEKYLE. . . . . . . . NPRHVEIQ. . . . . . . . . VLADGQGNAIYLAERDCSMQRRHQKVVEEAP
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Template Sequence  I. . . . . . . . . DNQGQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYNIYLYREGVLRTSSEGNEMFFEEFNQYLVTSL
Template Known Secondary structure  S.........TTTTS


SSB

BTTTTB



TT

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TTSSS
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   173 ......180.........190.........200.........210.........220.........230.........240...
 
   245....250.........260....... ..270.........280 .........290....
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Query Sequence  APGITPELRRYIGERCAKACVDI. . . . . . . . . . . GYRGAGTFEFLFE. NGEFYFIEMNTRIQ
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Template Sequence  NINLENSILCQIKEIIRVCLSCLEPAISTKYLPYHSFQLFGFDFMVDKNLKVWLIEVNGAPA
Template Known Secondary structure  SS
TTTTTT

SSSSS
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   276...280.........290.........300.........310.........320.........330.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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