|   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | |
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
A | V | A | I | H | P | G | Y | G | F | L | S | E | N | A | N | F | A | E | Q | V | E | R | S | G | F | I | F | I | G | P | K | A | E | T | I | R | L | M | G | D | K | V | S | A | I | A | A | M | K | K | A | G | V | P | C | V | P | G | S | D | G | P | L | G | D | D | M | D | K | N | R | A | I | A | K | R | . |
. |
. |
Query Conservation |   |
  |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |
|   |
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|   |   | . |
|   |
|
|
|
|
|   |   |
|   |
|
|   |
|
|   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
C | D | C | L | I | S | F | H | S | K | G | F | P | L | D | K | A | V | A | Y | A | K | L | R | N | . |
P | F | V | I | N | D | L | N | M | Q | Y | L | I | Q | D | R | R | E | V | Y | S | I | L | Q | A | E | G | I | L | L | P | R | Y | A | I | L | N | R | D | P | N | N | P | K | E | C | N | L | I | E | G | E | D | H |
Template Known Secondary structure |   |
| S |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  | S | B |
| S |  |  |  |  |  |  | T | B |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  |
|
|
| T | T |
| S | S |
|
|
|  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
  |
  |   |
|
|
|
|
|
|
|
152 | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
I | G | Y | P | V | I | I | K | A | S | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | G | R | G | M | R | V | V | R | G | D | A | E | L | A | Q | S | I | S | M | T | R | A | E | A | K | A | A | F | S | N | D | M | V | Y | M | E | K | Y | L | E | N | P | R | H | V | E | I | Q |
Query Conservation |   |
. | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|
|
|
|
|   |   |   |
| . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |
|
|
|
|
Template Sequence |   |
V | E | V | N | G | E | V | F | Q | K | P | F | V | E | K | P | V | S | A | E | D | H | N | V | Y | I | Y | Y | P | T | S | A | G | G | G | S | Q | R | L | F | R | K | I | G | S | R | S | . |
. |
. |
S | V | Y | S | P | E | S | N | V | R | K | T | G | S | Y | I | Y | E | E | F | M | P | T | D | G | T | D | V | K | V |
Template Known Secondary structure |   |
 |  |  | T | T |  |  |  |  | S | S |  |  |  |  |  | S | B | T | T |
|
|
|
|  |  |  |
|
| G | G | G | T |
|
|  |  |  |  |  |  |  |  | T | T |  |  | . | . | . |  |  |  |  | S |
|
| S |
|
| S | S | S |
|  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
  |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
|
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | A | D | G | Q | G | N | A | I | Y | L | A | E | R | . |
. |
. |
D | C | S | M | Q | R | R | H | Q | K | V | V | E | E | A | P | A | P | G | I | T | P | E | L | R | R | Y | I | G | E | R | C | A | K | A | C | V | D | I | G | Y | R | G | A | G | T | F | E | F | L | F | E | N | G | E | F | Y | F | I | E | M | N |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   | . |   |
|
|   | . | . | . | . |
|   |   |   |
|
|   |
|
|   |   |
|
|
|   | . |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
Y | T | V | G | P | D | Y | A | H | A | E | A | R | K | S | P | A | L | D | G | K | V | E | R | D | S | E | G | K | E | V | R | Y | P | V | . |
I | L | N | A | . |
. |
. |
. |
R | E | K | L | I | A | W | K | V | C | L | A | F | K | Q | . |
T | V | C | G | F | D | L | L | R | A | N | G | Q | S | Y | V | C | D | V | N |
Template Known Secondary structure |   |
 |  |  | S | T | T |
|  |  |  |  |  |  |  |
| S | S | S |
|
| B |
|
| B |
| S | S | S | S | B |
|
|  |  |
| . |
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | B | . | S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | |
. | . | . | . | |
|
|
|
. | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | |
. | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . |
  |