Job Description P24182 Confidence 89.33% Date Thu Jan 5 11:41:00 GMT 2012 Rank 471 Aligned Residues 146 % Identity 13% Template c3oa0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.
Predicted Secondary structure											.																																																															.	.	.	.	.
Query SS confidence											.																																																															.	.	.	.	.
Query Sequence		L	D	K	I	V	I	A	N	R	.	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	.	.	.	.	.	T	G	A
Query Conservation											.																																																															.	.	.	.	.
Alig confidence											.																																								.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		M	T	R	F	A	L	T	G	L	A	G	Y	I	A	P	R	H	L	K	A	I	K	E	V	G	G	V	L	V	A	S	L	D	P	A	T	N	V	G	L	V	D	S	F	F	P	E	A	E	.	.	.	.	.	.	.	.	.	F	F	T	E	P	E	A	F	E	A	Y	L	E	D	L	R	D	R	G	E	G	V
Template Known Secondary structure										T	T	S	S	S											T	T									S	S				G	G	G	G	G	T		T	T			.	.	.	.	.	.	.	.	.			S															T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	I	H	P	G	Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P
Query Conservation
Alig confidence														.																	.
Template Conservation														.																	.
Template Sequence		D	Y	L	S	I	A	S	P	N	H	L	H	.	Y	P	Q	I	R	M	A	L	R	L	G	A	N	A	L	S	.	E	K	P	L	V	L	W	P	E	E	I	A	R	L	K	E	L	E	A	R	T	G	R	R	V	Y	T	V	L	Q	L	R	V	H	P	S	L	L	A	L	K	E	R	L	G	Q	E	K	G	A
Template Known Secondary structure		S						S		G	G	G		.										T	T						.		S	S	S		S																T								G	G	G	G													T			S
Template Predicted Secondary structure														.																	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		156	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions