Return to main results Retrieve Phyre Job Id

Job DescriptionP24182
Confidence100.00%DateThu Jan 5 11:41:00 GMT 2012
Rank27Aligned Residues369
% Identity17%Templatec3k5iB_
PDB info PDB header:lyaseChain: B: PDB Molecule:phosphoribosyl-aminoimidazole carboxylase; PDBTitle: crystal structure of n5-carboxyaminoimidazole synthase from2 aspergillus clavatus in complex with adp and 5-3 aminoimadazole ribonucleotide
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP
Query Conservation     



   
  
  




   
  

 
    
  
     

    
          
 
 
  

     
 


Alig confidence 

































.















.......











..







Template Conservation      




 
     

 

   
  
      .                .......   
   
    ..   
 
  
Template Sequence  NSRKVGVLGGGQLGRMLVESANRLNIQVNVLDAD. NSPAKQISAHDGHVTG. . . . . . . SFKEREAVRQLA. . KTCDVVTA
Template Known Secondary structure  T
S


ST

ST.T
TTGGG

SS

S.......
TTS..TT
S
Template Predicted Secondary structure 











.





.......



..

Template SS confidence 















































































   3......10.........20.........30...... ...40.........50.. .......60.... .....70..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
Query Conservation                
   

   

         

          


 
                       
 



Alig confidence  ....
















































.

























Template Conservation  ....  
                           

      
   

  
  .                    
 



Template Sequence  . . . . EIEHVDTYALEEVASEVKIEPSWQAIRTIQNKFNQKEHLRKYGIPMAEH. RELVENTPAELAKVGEQLGYPLMLKS
Template Known Secondary structure  ....SSSS

TTTSSS
TSTTT

B

.SS


SS
Template Predicted Secondary structure  ....



















.












Template SS confidence 















































































   73......80.........90.........100.........110.........120. ........130.........140.......
 
   161........170.........180.........190.........200....... ..210.........220.........230.........
Predicted Secondary structure 




















.












Query SS confidence 














































.































Query Sequence  SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENP. RHVEIQVLADGQGNAIYLAERDCSMQRRHQKV
Query Conservation    
 
  

  
    

      
            




 
 
 .         

                     
Alig confidence  ....


















........















.





















...






Template Conservation  ....                   ........       



 
 
  
 

      
           ...       
Template Sequence  . . . . KTRGNFRVNSQDDIPEALE. . . . . . . . ALKDRPLYAEKWAYFKMELAVIVVKTKDEVLSYPTVETV. . . QEDSICK
Template Known Secondary structure  ....




SGGG........TT
SS




SS



...TT
Template Predicted Secondary structure  ....






........









...


Template SS confidence 















































































   148.150.........160...... ...170.........180.........190.........200..... ....210..
 
   240.........250.........260.........270.........280 .........290.........300.........310........
Predicted Secondary structure 











.















Query SS confidence 








































.





































Query Sequence  VEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFE. NGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAG
Query Conservation      
   
       
   
      

  
   


   .     







 
         



       
 
Alig confidence 








































.





































Template Conservation                  
      
  


  
   


    

   




 
  
         
       
    
Template Sequence  LVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAILD
Template Known Secondary structure  S
TT

TTS
S
TTS
SS

GGGTTSSS
TT
Template Predicted Secondary structure 
























Template SS confidence 















































































   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   319320.........330.........340.........350.........360.........370.........380.........390........
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  QPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVA
Query Conservation                           
       
            
        
  
    

  
 
   
    

Alig confidence 










...




























.....












..
















Template Conservation             ...                           
 .....             ..
   
 
   
 
  
 
Template Sequence  LPIPAQSLEIR. . . QPSIMLNIIGGAAPDTHLQAAECALSIPN. . . . . ASIHLYSKGAAKP. . GRKMGHITVTAPTMHEA
Template Known Secondary structure 



GGGGS
S...S


SSSSTTSTT.....



S

T..T

SS
Template Predicted Secondary structure 










...

















.....








..



Template SS confidence 















































































   298.300........ .310.........320.........330....... ..340.........350 .........360.......
 
   399400.........
Predicted Secondary structure 
Query SS confidence 










Query Sequence  IARMKNALQEL
Query Conservation        

   
Alig confidence 










Template Conservation            
Template Sequence  ETHIQPLIDVV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 










   368.370........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions