Job Description P24182 Confidence 93.19% Date Thu Jan 5 11:41:00 GMT 2012 Rank 265 Aligned Residues 109 % Identity 10% Template c3dapB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline Resolution 2.20 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																						.
Query SS confidence					.																						.
Query Sequence		M	L	D	.	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	.	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I
Query Conservation					.																						.
Alig confidence					.																						.																.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		M	T	N	I	R	V	A	I	V	G	Y	G	N	L	G	R	S	V	E	K	L	I	A	K	Q	P	D	M	D	L	V	G	I	F	S	R	R	A	T	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	T	P	V	F	D	V	A	D	V	D	K	H	A	D	.	.	.	.	.	D	V	D	V	L
Template Known Secondary structure													S											T	T		S	S									S		S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S					G	G	G	G	G	G	G	T	T	.	.	.	.	.	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.														.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	G	Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		F	L	C	M	G	.	S	A	T	D	I	P	E	Q	A	P	K	F	A	Q	F	A	C	T	V	D	T	Y	D	N	H	R	D	I	P	R	H	R	Q	V	M	N	E	A	A	T	A	A	G	N
Template Known Secondary structure					S		.	T	T	T										T	T	T	S									G	G	G																T
Template Predicted Secondary structure							.
Template SS confidence
		63	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions