Return to main results Retrieve Phyre Job Id

Job DescriptionP24182
Confidence100.00%DateThu Jan 5 11:41:00 GMT 2012
Rank1Aligned Residues444
% Identity44%Templatec3bg5C_
PDB info PDB header:ligaseChain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50...... ...60.........70.........80
Predicted Secondary structure 






















.







Query SS confidence 






















































.























Query Sequence  LDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPS. VKSYLNIPAIISAAEITGAVAIHP
Query Conservation    



   
  
  




   
  

 
    
  
     

    
     .     
 
 
  

     
 


Alig confidence 






















































.























Template Conservation 















 


 



 





  
  
     


   
        





 

 


   



 
Template Sequence  IKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHP
Template Known Secondary structure 

S

TT

STTTT
GGGGSSS

SS

SSSTTT
TTT


Template Predicted Secondary structure 


























Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
Query Conservation                
   

   

         

          


 
                       
 



Alig confidence 




















































.

























Template Conservation 






 
 

 

   

  



 


    

   
  
   



 
 .    
 
 


   
  








Template Sequence  GYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPG. TDGPIKSYELAKEFAEEAGFPLMIKA
Template Known Secondary structure 
SSSSTT
TT
SSS
SSTT

B


.
SS


TTSS
S
Template Predicted Secondary structure 





















.










Template SS confidence 















































































   117..120.........130.........140.........150.........160......... 170.........180.........190.....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV
Query Conservation    
 
  

  
    

      
            




 
 
          

                      
Alig confidence 















































































Template Conservation    









   


  
   
  

   

   




 
 
 







 
  
 

 
 








 



Template Sequence  TSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVV
Template Known Secondary structure  SS


GGG
STTTSS




SS

TTS
SSS
Template Predicted Secondary structure 




































Template SS confidence 















































































   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   241........250.........260.........270.........280.........290.........300.........310.........320
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQP
Query Conservation     
   
       
   
      

  
   


        







 
         



       
 
  
Alig confidence 















































































Template Conservation 
 


  
       
   
 

  



 
  






    












 


 






  

 

 
  
Template Sequence  EVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGDEFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGAD
Template Known Secondary structure  S
SS

TT

TT
S

TT


T

Template Predicted Secondary structure 




























Template SS confidence 















































































   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   321.. ......330.........340.... .....350.........360.........370.. .......380.........390..
Predicted Secondary structure 


......












.














.












Query SS confidence 


. . . . . .




















.



























.



















Query Sequence  LSI. . . . . . KQEEVHVRGHAVECRINAEDP. NTFLPSPGKITRFHAPGGFGVRWESHIY. AGYTVPPYYDSMIGKLICYG
Query Conservation     ......                    
.       
            
       . 
  
    

  
 
   
Alig confidence 


......




















.



























.



















Template Conservation 
                
 


 

 



   
 
  
 
     
 
  

 
      
  
   


 
 


  
Template Sequence  LFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHA
Template Known Secondary structure  TTSTTT



GGG



SSTTTTS


S



TTSS
STT

TTS

Template Predicted Secondary structure 





















































Template SS confidence 















































































   357..360.........370.........380.........390.........400.........410.........420.........430......
 
   393......400.........410.........420.........430.........440......
Predicted Secondary structure 














Query SS confidence 





















































Query Sequence  ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGL
Query Conservation      

      

    
 
   

      
    
      
         
Alig confidence 





















































Template Conservation    
  
  
   

    
 

 

   
   
    
      
       

Template Sequence  ISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEETPEL
Template Known Secondary structure  SS
SS

S
TS


TTTTTT
GGG
Template Predicted Secondary structure 
















Template SS confidence 





















































   434.....440.........450.........460.........470.........480.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions