Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 30 Aligned Residues 307 % Identity 17% Template c2z04A_ PDB info PDB header:lyase Chain: A: PDB Molecule:phosphoribosylaminoimidazole carboxylase atpase PDBTitle: crystal structure of phosphoribosylaminoimidazole2 carboxylase atpase subunit from aquifex aeolicus Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G
Query Conservation
Alig confidence				.																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation				.																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		L	T	.	V	G	I	L	G	G	G	Q	L	G	W	X	T	I	L	E	G	R	K	L	G	F	K	F	H	V	L	.	.	E	D	K	E	N	A	P	A	C	R	V	A	D	R	C	F	.	.	.	.	.	.	.	.	.	.	.	.	R	T	G	Q	I	S	E	F	V	D	S	.	.	C	D	I	I	T	Y	E
Template Known Secondary structure				.							S											G	G	G	T							.	.		S	S	S	S							S	S				.	.	.	.	.	.	.	.	.	.	.	.		G	G	G								.	.		S					S
Template Predicted Secondary structure				.																												.	.																	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		2	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S
Query Conservation
Alig confidence				.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation				.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		F	E	.	.	.	.	.	.	H	I	K	D	E	V	L	E	K	C	E	S	K	L	I	P	N	P	Q	A	L	Y	V	K	K	S	R	I	R	E	K	L	F	L	K	K	H	G	F	P	V	P	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	P	V	V	I	K	A	.
Template Known Secondary structure		S	S	.	.	.	.	.	.											T	T	T	B	S	S		T							T											T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Predicted Secondary structure				.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		65	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																			.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	M	Q	R	R	H	Q	K	V	V	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	I	I	E	E	F	V	K	F	E	A	E	I	S	C	I	G	V	R	D	R	E	G	K	T	Y	F	Y	P	Q	P	F	N	K	H	E	E	G	I	L	I	Y	N	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S											T	T															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	.	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	I	T	G	V	D	L	I	K	E	Q	L	R	I	A	A	G	Q	P
Query Conservation																																									.
Alig confidence								.	.	.	.	.	.																												.
Template Conservation								.	.	.	.	.	.
Template Sequence		V	P	Y	A	K	L	.	.	.	.	.	.	K	E	A	E	E	I	T	K	R	L	X	E	L	L	D	I	V	G	V	F	T	V	E	F	F	L	L	K	D	G	R	V	L	I	N	E	F	A	P	R	V	H	N	T	G	H	W	T	L	D	G	A	Y	T	S	Q	F	E	N	L	L	R	A	I	T	E	X	P
Template Known Secondary structure								.	.	.	.	.	.														T	T													T	T	S									S	S			G	G	G	T	T					B	S	S											T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C	Y	G	E	N	R	D	V	A	I	A
Query Conservation
Alig confidence											.	.	.	.																			.	.	.	.	.	.	.													.	.	.							.	.
Template Conservation											.	.	.	.																			.	.	.	.	.	.	.													.	.	.							.	.
Template Sequence		L	G	S	T	E	L	K	L	P	.	.	.	.	S	G	X	V	N	I	L	G	K	S	Y	E	E	I	P	L	K	E	.	.	.	.	.	.	.	I	L	S	V	E	G	A	K	L	Y	W	Y	.	.	.	G	K	E	K	K	P	.	.	R	R	K	V	G	H	V	N	V	V	G	R	S	K	E	E	V	V	E
Template Known Secondary structure							B	S	S		.	.	.	.								S			G	G	G	S					.	.	.	.	.	.	.		T	T	S	T	T							.	.	.						T	.	.	T											S	S
Template Predicted Secondary structure											.	.	.	.																			.	.	.	.	.	.	.													.	.	.							.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.								310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		401	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	K	N	A	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	E	R	V	F	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions