Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 20 Aligned Residues 399 % Identity 18% Template c2ys6A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylglycinamide synthetase; PDBTitle: crystal structure of gar synthetase from geobacillus kaustophilus Resolution 2.21 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G	Y	G
Query Conservation
Alig confidence																																				.	.	.												.	.	.	.	.	.	.
Template Conservation																																				.	.	.												.	.	.	.	.	.	.
Template Sequence		N	V	L	V	I	G	R	G	G	R	E	H	A	I	A	W	K	A	A	Q	S	P	L	V	G	K	L	Y	V	A	P	G	N	P	.	.	.	G	I	A	D	V	A	E	L	V	H	I	.	.	.	.	.	.	.	D	E	L	D	I	E	A	L	V	Q	F	A	K	Q	Q	A	I	D	L	T	I	V	G	P	E
Template Known Secondary structure								S	S											T	T		T	T											T	.	.	.	T	G	G	G	T	S						.	.	.	.	.	.	.		T	T												T	T								S
Template Predicted Secondary structure																																				.	.	.												.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S	G	G
Query Conservation
Alig confidence		.																																																			.	.	.																								.	.	.
Template Conservation		.																																																			.	.	.																								.	.	.
Template Sequence		.	A	P	L	A	S	G	I	V	D	R	F	M	A	E	G	L	R	I	F	G	P	S	Q	R	A	A	L	I	E	G	S	K	A	F	A	K	E	L	M	K	K	Y	G	I	P	T	A	D	H	A	.	.	.	A	F	T	S	Y	E	E	A	K	A	Y	I	E	Q	K	G	A	P	I	V	I	K	A	.	.	.
Template Known Secondary structure		.					T	T								T	T					S																							T			B					.	.	.			S														S	S						.	.	.
Template Predicted Secondary structure		.																																																			.	.	.																								.	.	.
Template SS confidence
			72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	.	.	.	.	.	E	R	D	C	S	M	Q	R	R	H	Q	K
Query Conservation																																																																	.	.	.	.	.
Alig confidence		.																																																															.	.	.	.	.
Template Conservation		.
Template Sequence		.	D	G	K	G	V	T	V	A	Q	T	V	E	E	A	L	A	A	A	K	A	A	L	V	D	G	Q	F	G	T	A	G	S	Q	V	V	I	E	E	Y	L	E	G	E	E	F	S	F	M	A	F	V	N	G	E	K	V	Y	P	L	A	I	A	Q	D	H	K	R	A	Y	D	G	D	E	G	P	N	T	G	G
Template Known Secondary structure		.									S	S															S			B	T	T	B											S											T	T								B								T	T	T						S
Template Predicted Secondary structure		.
Template SS confidence
			145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																							.	.	.	.										.	.																															.
Query SS confidence																							.	.	.	.										.	.																															.
Query Sequence		V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	.	.	.	.	C	A	K	A	C	V	D	I	G	.	.	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	V	T	E	M	I	T	G	V	D	L	I	K	E
Query Conservation																							.	.	.	.										.	.																															.
Alig confidence																							.	.	.	.										.	.																															.
Template Conservation
Template Sequence		M	G	A	Y	S	P	V	P	Q	I	S	D	E	M	M	D	A	A	L	E	A	I	L	R	P	A	A	K	A	L	A	A	E	G	R	P	F	L	G	V	L	Y	A	G	L	M	A	T	A	N	G	P	K	V	I	E	F	N	A	R	F	G	D	P	E	A	Q	V	V	L	P	R	L	K	T	D	L	V	E	A
Template Known Secondary structure		S							T	T	S												T											T	T															T	T									S	S			T	T						G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	I	A	A	G	Q	P	L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C	Y
Query Conservation
Alig confidence																																					.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		V	L	A	V	M	D	G	K	E	L	E	L	E	W	T	D	E	A	V	L	G	V	V	L	A	A	K	G	Y	P	G	A	Y	E	R	.	.	.	.	G	A	E	I	R	G	L	D	R	I	S	P	D	A	L	L	F	H	A	G	T	K	R	E	G	G	A	W	Y	T	N	G	G	R	V	L	L	L	A	A	K
Template Known Secondary structure							T	T							B		S	S										T	T	T	T	S	S				.	.	.	.					B		G	G	G	S		T	T	S					S	S					T	T						S	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	N	R	D	V	A	I	A	R	M	K	N	A	L	Q	E	L	I	I	D	G	I	K	T	N	V	D	L	Q	I	R	I	M	N	D	E	N
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		G	E	T	L	A	K	A	K	E	K	A	Y	E	Q	L	A	A	I	D	C	D	G	L	.	.	.	.	.	F	Y	R	R	D	I	G	R	R	A
Template Known Secondary structure			S	S													T	T		B		T	T		.	.	.	.	.				S		T	T	T	T	T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.						.	.	.	410	.	.	.	.	.	.