Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 17 Aligned Residues 406 % Identity 18% Template c2xd4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: nucleotide-bound structures of bacillus subtilis glycinamide2 ribonucleotide synthetase Resolution 2.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	.	.	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G
Query Conservation																						.	.
Alig confidence																						.	.													.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		N	V	L	I	I	G	K	G	G	R	E	H	T	L	A	W	K	A	A	Q	S	S	L	V	E	N	V	F	A	A	P	G	N	D	.	.	.	.	.	G	M	A	A	S	A	Q	L	V	N	I	.	.	.	.	.	.	.	E	E	S	D	H	A	G	L	V	S	F	A	K	Q	N	Q	V	G	L	T	I	V	G
Template Known Secondary structure								S	S												T		T	T		S									G	.	.	.	.	.	G	G	T	T	T							.	.	.	.	.	.	.		T	T												T	T
Template Predicted Secondary structure																																				.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S
Query Conservation
Alig confidence				.																																																			.	.	.
Template Conservation				.																																																			.	.	.
Template Sequence		P	E	.	V	P	L	I	E	G	L	V	D	E	F	E	K	A	G	L	H	V	F	G	P	S	K	A	A	A	I	I	E	G	S	K	Q	F	A	K	D	L	M	K	K	Y	D	I	P	T	A	E	Y	E	.	.	.	T	F	T	S	F	D	E	A	K	A	Y	V	Q	E	K	G	A	P	I	V	I	K	A	D
Template Known Secondary structure		S		.					T	T								T	T					S			T	T	T	T																T	T			B					.	.	.			S														S	S						S
Template Predicted Secondary structure				.																																																			.	.	.
Template SS confidence
		70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	.	.	.	.	.	R	D	C	S	M	Q	R	R	H
Query Conservation																																																																				.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.
Template Conservation
Template Sequence		G	L	A	A	G	K	G	V	T	V	A	M	T	E	E	E	A	I	A	C	L	H	D	F	L	E	D	E	K	F	G	D	A	S	A	S	V	V	I	E	E	Y	L	S	G	E	E	F	S	L	M	A	F	V	K	G	E	K	V	Y	P	M	V	I	A	Q	D	H	K	R	A	F	D	G	D	K	G	P	N	T
Template Known Secondary structure		S		G	G	G							S	S												T	T	S		T	T	T	T	T	T	S	S									S											T	T								B								T	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.												.	.																														.
Query SS confidence																								.	.	.	.												.	.																														.
Query Sequence		Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	.	.	.	.	R	C	A	K	A	C	V	D	I	G	Y	.	.	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	V	T	E	M	I	T	G	V	D	L	I
Query Conservation																								.	.	.	.												.	.																														.
Alig confidence																								.	.	.	.												.	.																														.
Template Conservation
Template Sequence		G	G	M	G	A	Y	S	P	V	P	Q	I	S	E	E	T	V	R	H	A	V	E	T	I	V	K	P	A	A	K	A	M	V	Q	E	G	R	S	F	T	G	V	L	Y	A	G	L	M	L	T	E	N	G	S	K	V	I	E	F	N	A	R	F	G	D	P	E	T	Q	V	V	L	P	R	M	E	S	D	L	V
Template Known Secondary structure		S		S					S		T	T	S												T										T	T	T															T	T									S	S			T	T						G	G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	Q	L	R	I	A	A	G	Q	P	L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I
Query Conservation
Alig confidence																																							.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		Q	V	L	L	D	L	L	D	D	K	E	V	D	L	R	W	K	D	T	A	A	V	S	V	V	L	A	S	E	G	Y	P	E	S	Y	A	K	.	.	.	.	G	T	P	I	G	S	L	A	A	E	T	E	Q	V	V	V	F	H	A	G	T	K	A	E	G	G	E	F	V	T	N	G	G	R	V	A	N	V	T
Template Known Secondary structure									T	T							B		S											T	T	T	T	S	S				.	.	.	.										S	S	S	S						S	S					S	S	S					S	S
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	G	E	N	R	D	V	A	I	A	R	M	K	N	A	L	Q	E	L	I	I	D	G	I	K	T	N	V	D	L	Q	I	R	I	M	N	D	E	N	F	Q	H	G	G
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		A	F	D	E	T	F	E	A	A	R	D	R	V	Y	K	A	V	D	E	I	F	K	P	G	L	.	.	.	.	.	F	F	R	K	D	I	G	A	R	A	L	K	A	A	Q
Template Known Secondary structure					S	S																		T	T		.	.	.	.	.				S		T	T						T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.