Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 42 Aligned Residues 271 % Identity 18% Template c2r85B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:purp protein pf1517; PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		M	L	D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	.	.	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I
Query Conservation																																								.	.
Alig confidence														.																										.	.													.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation														.																																								.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		M	K	V	R	I	A	T	Y	A	S	H	S	.	A	L	Q	I	L	K	G	A	K	D	E	G	F	E	T	I	A	F	G	S	S	K	V	K	P	L	Y	T	K	Y	F	P	V	A	D	Y	F	I	E	.	.	.	.	.	.	.	.	E	K	Y	P	E	E	E	L	L	N	L	.	.	.	.	.	.	N	A	V
Template Known Secondary structure										S	S	T	T	.											T	T							S		G	G	G						T	T	S				S					.	.	.	.	.	.	.	.	S	S									T	.	.	.	.	.	.	T
Template Predicted Secondary structure														.																																								.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.							.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	G	Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I
Query Conservation
Alig confidence											.																			.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																			.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	P	T	G	S	F	V	A	.	H	L	G	I	E	L	V	E	N	M	K	V	P	Y	F	G	N	K	.	R	V	L	R	W	E	S	D	R	N	L	E	R	K	W	L	K	K	A	G	I	R	V	P	E	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	E	D	P	D	D	I	E	K	P	V	I	V
Template Known Secondary structure						T	T				.									T		S	S		B	B	S		T	.	T							S											T	T						B		.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	G			S
Template Predicted Secondary structure											.																			.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.													120	.	.	.	.	.	.	.	.	.	130	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		K	A	S	G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																					.																																													.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.																					.
Template Sequence		K	P	.	.	.	.	.	G	K	G	Y	F	L	A	K	D	P	E	D	F	W	R	K	A	E	K	F	.	L	G	I	K	R	K	E	D	L	K	N	I	Q	I	Q	E	Y	V	L	G	V	P	V	Y	P	H	Y	F	Y	S	K	V	R	E	E	L	E	L	M	S	I	D	R	R	Y	E	S	N	V	D	A	I
Template Known Secondary structure				.	.	.	.	.		T	T					S	S												.	T				S	S	T	T		S	S																				T	T	T	T															G	G	G	G
Template Predicted Secondary structure				.	.	.	.	.																					.
Template SS confidence
		132	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
													231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	S	M	Q	R	R	H	Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	.	.	.	.	.	G	Y	R	G	A	G	T	F	E	F	L	F	E	.	N	G	E	F	Y	F	I	E	M	N	T	R	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.																								.	.	.	.	.														.
Template Conservation																									.	.
Template Sequence		G	R	I	P	A	K	D	Q	L	E	F	D	M	D	I	T	Y	T	V	I	G	N	I	.	.	P	I	V	L	R	E	S	L	L	M	D	V	I	E	A	G	E	R	V	V	K	A	A	E	E	L	M	G	G	L	W	G	P	F	C	L	E	G	V	F	T	P	D	L	E	F	V	V	F	E	I	S	A	R	I
Template Known Secondary structure		G	G	S							T	S													.	.						G	G	G																			S	S														T	T	S										S
Template Predicted Secondary structure																									.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	E	H	P	V	T	E	M	I	T	G	V	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	G	T	N	I	F	V	N	G	S	P	Y	T	W
Template Known Secondary structure			G	G	G	G	G	G	T	T			T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions