Return to main results Retrieve Phyre Job Id

Job DescriptionP24182
Confidence99.04%DateThu Jan 5 11:41:00 GMT 2012
Rank88Aligned Residues228
% Identity18%Templatec2pbzC_
PDB info PDB header:ligaseChain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of an imp biosynthesis protein purp from2 thermococcus kodakaraensis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40 .........50.........60.........70.........80.........90..
Predicted Secondary structure 










.























Query SS confidence 


























.



















































Query Sequence  ALRILRACKELGIKTVAVHSSADRDLK. HVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFA
Query Conservation 
  




   
  

 
    
  
 .    

    
          
 
 
  

     
 


            
Alig confidence 


























.



















..............














..
Template Conservation 



  









 

   


 
      

 

 
   


 
..............
 
 





  


.. 
Template Sequence  SLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAEEXTSILND. . . . . . . . . . . . . . DGIVVPHGSFVAYLG. . I
Template Known Secondary structure  TT


TTTT
TT
S
S
S

TT

..............SSB


BTTS
..
Template Predicted Secondary structure 














..............




..
Template SS confidence 















































































   13......20.........30.........40.........50.........60 .........70..... .
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  EQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVV
Query Conservation    
   

   

         

          


 
                       
 



  
 
  

  
Alig confidence 











.























........................


















Template Conservation 
 

   

 

.

  



     
  


 



........................ 
 


   

  



 
Template Sequence  EAIEKAKARFFG. NRRFLKWETTFELQDKALEGAGIP. . . . . . . . . . . . . . . . . . . . . . . . RVEVVEPEDAKPDELYFVR
Template Known Secondary structure  T

S

BS.
SSGGGGGS
TT

........................B

B

S



SS

Template Predicted Secondary structure 





.








........................









Template SS confidence 















































































   77..80........ .90.........100.........110.. .......120.........130.
 
   173......180.........190.........200.........210.........220........ .230.........240..
Predicted Secondary structure 
















..........







Query SS confidence 























































. . . . . . . . . .













Query Sequence  RGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAER. . . . . . . . . . DCSMQRRHQKVVEE
Query Conservation      

      
            




 
 
          

          ..........              
Alig confidence 





.............




































..........













Template Conservation        .............

 
  
 




 
   
  





   








    

  



      



Template Sequence  IEGSEL. . . . . . . . . . . . . EERLSPYRVERFIPGVYLYVHFFYSPILERLELLGVDERVLIADGNARWPVKPLPYTIVGN
Template Known Secondary structure 



.............S








S
TTTTTT
SSSSS

S




Template Predicted Secondary structure 

.............














Template SS confidence 















































































   132..... ..140.........150.........160.........170.........180.........190........
 
   243......250.........260....... ..270.........280.........290.......
Predicted Secondary structure 





......
















Query SS confidence 
























. . . . . .





























Query Sequence  APAPGITPELRRYIGERCAKACVDI. . . . . . GYRGAGTFEFLFENGEFYFIEMNTRIQVEH
Query Conservation   
   
       
   
      
......
  
   


        







 
  
Alig confidence 



.



















......











.
















Template Conservation   
  .





  
   

 

 

  
 


 



 

   .
  






 

 


Template Sequence  RAIA. LRESLLPQLYDYGLAFVRTXRELEPPGVIGPFALHFAY. DGSFKAIGIASRIDGGS
Template Known Secondary structure 

.

GGGSTT


S
.SSS
SSB
SGG
Template Predicted Secondary structure 
.











.






Template SS confidence 




























































   215... .220.........230.........240.........250...... ...260.........270...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions