Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 19 Aligned Residues 399 % Identity 17% Template c2ip4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8 Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	.	.	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P
Query Conservation																							.	.
Alig confidence																							.	.													.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		X	K	V	L	V	V	G	S	G	G	R	E	H	A	L	L	W	K	A	A	Q	S	P	R	V	K	R	L	Y	A	A	P	G	N	A	.	.	.	.	.	G	X	E	A	L	A	E	L	V	P	.	.	.	.	.	.	.	.	W	N	G	D	V	E	A	L	A	D	W	A	L	A	E	G	I	D	L	T	L	V
Template Known Secondary structure									S	S												T		S	S											T	.	.	.	.	.	T	G	G	G	T	S					.	.	.	.	.	.	.	.			S													T
Template Predicted Secondary structure																																					.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A
Query Conservation
Alig confidence					.																																																			.	.	.
Template Conservation					.																																																			.	.	.
Template Sequence		G	P	E	.	A	P	L	V	E	G	I	A	D	A	F	Q	A	R	G	L	L	L	F	G	P	T	Q	K	A	A	X	I	E	G	S	K	A	F	A	K	G	L	X	E	R	Y	G	I	P	T	A	R	Y	R	.	.	.	V	F	R	E	P	L	E	A	L	A	Y	L	E	E	V	G	V	P	V	V	V	K	D
Template Known Secondary structure			S	S	.					T	T									T					S																						T				B					.	.	.			S	S													S	S
Template Predicted Secondary structure					.																																																			.	.	.
Template SS confidence
		68	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		S	G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	.	.	.	.	.	M	Q	R	R
Query Conservation																																																																									.	.	.	.	.
Alig confidence																												.	.	.	.																																										.	.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		S	G	L	A	A	G	K	G	V	T	V	A	F	D	L	H	Q	A	K	Q	A	V	A	N	I	L	.	.	.	.	N	R	A	E	G	G	E	V	V	V	E	E	Y	L	E	G	E	E	A	T	V	L	A	L	T	D	G	E	T	I	L	P	L	L	P	S	Q	D	H	K	R	L	L	D	G	D	Q	G	P	X
Template Known Secondary structure		T	T	S		S	S	T	T					S													T	.	.	.	.	T	S	S	S												S										S	S	S								B								T	T	T
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																																.
Query SS confidence																																		.	.	.	.	.																																.
Query Sequence		H	Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	.	.	.	.	.	G	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	V	T	E	M	I	T	G	V	D	L	I
Query Conservation																																		.	.	.	.	.																																.
Alig confidence																																		.	.	.	.	.																																.
Template Conservation
Template Sequence		T	G	G	X	G	A	V	A	P	Y	P	X	D	E	A	T	L	R	R	V	E	E	E	I	L	G	P	L	V	R	G	L	R	A	E	G	V	V	Y	R	G	V	V	Y	A	G	L	X	L	T	R	E	G	P	K	V	L	E	F	N	A	R	F	G	D	P	E	A	Q	A	L	L	P	L	L	E	N	D	L	V
Template Known Secondary structure			S		S					S															T											T	T															S	S									S	S			T	T						T	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	Q	L	R	I	A	A	G	Q	P	L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		E	L	A	L	R	V	A	E	G	R	L	A	G	T	.	.	.	R	L	S	W	K	E	G	A	A	A	C	V	V	L	A	A	P	G	Y	P	E	S	P	R	K	G	I	P	L	H	V	P	E	P	P	E	G	V	L	V	F	H	A	G	T	R	R	E	G	G	R	L	V	S	A	G	G	R	V	L	N	V	V
Template Known Secondary structure										T		G	G	G		.	.	.				B		S	S										T	T	T	T	T	S						B		B						T	T						S	S				S	S	S	S					S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	G	E	N	R	D	V	A	I	A	R	M	K	N	A	L	Q	E	L	I	I	D	G	I	K	T	N	V	D	L	Q	I	R	I	M	N	D	E	N	F
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		G	L	G	R	D	L	K	E	A	L	E	R	A	Y	A	Y	I	P	Q	V	G	F	P	G	A	.	.	.	.	.	V	Y	R	R	D	I	G	R	R	A	L
Template Known Secondary structure					S	S												G	G	G	S	B		T	T		.	.	.	.	.	B			S		T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.						.	.	.	.	.	.	.	.	410	.	.