Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 23 Aligned Residues 379 % Identity 16% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G
Query Conservation
Alig confidence																																.	.																			.	.	.	.	.	.	.
Template Conservation																																.	.																			.	.	.	.	.	.	.
Template Sequence		A	Q	K	I	L	L	L	G	S	G	E	L	G	K	E	I	A	I	E	A	Q	R	L	G	V	E	V	V	A	V	.	.	D	R	Y	A	N	A	P	A	M	Q	V	A	H	R	S	Y	V	G	.	.	.	.	.	.	.	N	M	M	D	K	D	F	L	W	S	V	V	E	R	E	K	P	D	A	I	I	P	E
Template Known Secondary structure									S		S													T	T							.	.		S	S	T	T							S	S					S	.	.	.	.	.	.	.		T	T															S
Template Predicted Secondary structure																																.	.																			.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	.	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A
Query Conservation																																										.
Alig confidence				.	.																		.																			.														.	.	.
Template Conservation				.	.																		.																																	.	.	.
Template Sequence		I	E	.	.	A	I	N	L	D	A	L	F	E	F	E	K	D	G	Y	F	V	.	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	.	.	.	Y	A	T	T	L	D	E	L	Y	E	A	C	E	K	I	G	Y	P	C	H	T	K	A
Template Known Secondary structure		S	S	.	.		S											T	T			B	.	S	S									T	S											T	T									.	.	.			S	S													S	S
Template Predicted Secondary structure				.	.																		.																																	.	.	.
Template SS confidence
		90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		S	G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	.	.	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	M	Q	R	R	H	Q	K
Query Conservation																																																											.	.
Alig confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	I	M	S	G	S	Y	F	V	K	G	P	E	D	I	P	K	A	W	E	.	.	.	.	.	.	.	.	.	.	.	E	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E	N	G	E	I	V	T	T	F	P	K	P	V	G	H	Y	Q	I	D	G	D
Template Known Secondary structure		.	.	.	.	S									S	G	G	G						T	.	.	.	.	.	.	.	.	.	.	.													S													T	T	S																T	T
Template Predicted Secondary structure		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.												.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	.	V	T	E	M	I	T	G	V	D	L	I	K	E	Q	L	R	I	A
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		Y	H	A	S	W	Q	P	A	E	I	S	E	K	A	E	R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	G	L	G	I	F	G	V	E	M	F	V	K	G	D	K	V	W	A	N	E	V	S	P	R	P	H	D	T	G	M	V	T	L	A	S	H	P	P	G	F	S	E	F	A	L	H	L	R	A	V
Template Known Secondary structure								S																								S	S											T	T									S	S			G	G	G	G	G					S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		A	G	Q	P	L	S	I	K	Q	E	E	V	H	V	R	G	H	.	.	.	.	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C	Y	G
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		L	G	L	P	I	P	G	E	W	V	D	G	Y	R	L	F	P	M	L	I	P	A	A	T	H	V	I	K	A	K	V	S	G	Y	S	P	R	F	R	G	L	V	K	A	L	S	V	P	N	.	.	.	.	.	.	.	A	T	V	R	L	F	G	K	P	E	A	Y	V	G	R	R	L	G	I	A	L	A	W	D
Template Known Secondary structure			T									T	T							S	S										S	S				S										T	T	S	T	T	.	.	.	.	.	.	.									S				T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370								.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	R	D	V	A	I	A	R	M	K	N	A	L	Q	E	L	I	I	D	G	I	K	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	V	E	V	A	K	R	K	A	E	M	V	A	H	M	I	E	L	R	T	R	S	S	D
Template Known Secondary structure		S	S														T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions