 |
Job Description | P24182 | Confidence | 92.31% | Date | Thu Jan 5 11:41:00 GMT 2012 |
Rank | 317 | Aligned Residues | 102 |
% Identity | 14% | Template | c2duwA_ |
PDB info |
PDB header:ligand binding protein | Chain: A: PDB Molecule:putative coa-binding protein; |
PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
|
Resolution | UNK |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | |
|
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | K | I | V | I | A | N | R | . |
. |
. |
. |
G | E | I | A | L | R | I | L | R | A | C | K | E | L | G | I | K | T | V | A | V | H | S | . |
. |
. |
. |
. |
S | A | D | R | D | L | K | H | V | L | L | A | D | E | T | V | C | I | G | P | A | P | S | V | K | S | Y | L | N | I | P | A | I | I | S | A | A | E | I | T |
Query Conservation |   |
  |
|
|
|
|   |   |   | . | . | . | . |
|   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |   | . | . | . | . | . |   |   |
|   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|   |
|
|
|   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
R | T | I | A | L | V | G | A | S | D | K | P | D | R | P | S | Y | R | V | M | K | Y | L | L | D | Q | G | Y | H | V | I | P | V | S | P | K | V | A | G | K | T | L | L | G | Q | Q | G | Y | A | T | L | A | D | V | P | E | K | V | D | M | V | D | V | F | R | N | S | E | A | A | W | G | V | A | Q | E | A | I | A | I |
Template Known Secondary structure |   |
|
|  |  |  |  | S |
|
| S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| S | S | S | T | T | S |  |  | T | T |  |  |
|
| S | S | T | T | T |
| S | S |
|
| S |  |  |  |
|
| S |
| S | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | V | A | I | H | P | G | Y | G | F | L | S | E | N | A | N | F | A | E | Q | V | E | R | S | G | F | I | F | I | G | P | K |
Query Conservation |   |
  |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |
| . | . |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
G | A | K | T | L | W | L | Q | L | G | . |
. |
V | I | N | E | Q | A | A | V | L | A | R | E | A | G | L | S | V | V | M | D | R |
Template Known Secondary structure |   |
T |
|
|  |  |  |
|
| T | T | . | . |
|
|
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |
| S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | |
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|