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Job DescriptionP24182
Confidence100.00%DateThu Jan 5 11:41:00 GMT 2012
Rank6Aligned Residues439
% Identity33%Templatec1w96B_
PDB info PDB header:ligaseChain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20........ .30.........40.........50.........60.........70
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Query Sequence  LDKIVIANRGEIALRILRACKELGIKT. . . . . . . . . . . VAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAA
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Template Sequence  ISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIA
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S
TTSS
TT
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SSGGGTTT
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   5960.........70.........80.........90.........100.........110.........120.........130........
 
   71........80.........90........ .100.........110.........120.........130....
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Query Sequence  EITGAVAIHPGYGFLSENANFAEQVERS. . GFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGS. . . . . . . . . . . . . .
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Template Sequence  ERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTG
Template Known Secondary structure  TT
S

SSTTTT
TSTT

SS

S
STT

B

BTTTT




TTT
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   139140.........150.........160.........170.........180.........190.........200.........210........
 
   135....140.........150.........160.........170.........180.........190.........200.....
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Query Sequence  . . . . . . . . . DGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLE
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Template Sequence  LVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANE. . . . IPGSPIFIMKLAG
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GGGS
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SSTTSSGGG....STT




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   219220.........230.........240.........250.........260.........270.........280. ........290....
 
   206...210.........220.........230.........240.........250.........260.........270.........280 ...
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Query Sequence  NPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFE. . NGE
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Template Sequence  RARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGK
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TTS
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   295....300.........310.........320.........330.........340.........350.........360.........370....
 
   284.....290.........300.........310.........320.........330.. .......340........
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Query Sequence  FYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRG. . . . . . HAVECRINAEDPNTFL. . . . . . . . .
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Template Sequence  FYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPKGHC
Template Known Secondary structure 
S

TTT


TT

GGG
TT

TT





TT

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S
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   375....380.........390.........400.........410.........420.........430.........440.........450....
 
   349350.........360.........370.........380.........390.........400.........410... ......420....
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Query Sequence  . . . PSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDG. IKTNVDLQIRI
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Template Sequence  TACRITGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKELSIRGDFRTTVEYLIKL
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SS
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TT
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SS
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   455....460.........470.........480.........490.........500.........510.........520.........530....
 
   425....430.........440....
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Query Sequence  MNDENFQHGGTNIHYLEKKL
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Template Sequence  LETEDFEDNTITTGWLDDLI
Template Known Secondary structure  TST


TT
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   547..550.........560......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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