Job Description P24182 Confidence 100.00% Date Thu Jan 5 11:41:00 GMT 2012 Rank 25 Aligned Residues 377 % Identity 17% Template c1vkzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of phosphoribosylamine--glycine ligase (tm1250) from2 thermotoga maritima at 2.30 a resolution Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	I	V	I	A	N	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T	G	A	V	A	I	H	P	G
Query Conservation
Alig confidence				.																																		.	.	.	.	.	.	.							.	.	.	.	.	.	.	.														.	.
Template Conservation				.																																		.	.	.	.	.	.	.							.	.	.	.	.	.	.	.														.	.
Template Sequence		V	R	.	V	H	I	L	G	S	G	G	R	E	H	A	I	G	W	A	F	A	K	Q	G	Y	E	V	H	F	Y	P	G	N	A	G	T	.	.	.	.	.	.	.	K	R	D	G	T	N	.	.	.	.	.	.	.	.	H	P	Y	E	G	E	K	T	L	K	A	I	P	.	.	E	E	D	I	V	I	P	G
Template Known Secondary structure				.							S													T	T										T	T	G	.	.	.	.	.	.	.	G	G	T	S			.	.	.	.	.	.	.	.					T						T	S		.	.	S	S						S
Template Predicted Secondary structure				.																																		.	.	.	.	.	.	.							.	.	.	.	.	.	.	.														.	.
Template SS confidence
		4	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	S
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		S	E	.	.	.	.	.	.	.	.	.	.	E	F	L	V	E	R	S	N	V	F	G	P	V	K	E	V	A	R	L	E	G	S	K	V	Y	A	K	R	F	X	K	K	Y	G	I	R	T	A	R	F	E	.	.	.	V	A	E	T	P	E	E	L	R	E	K	I	K	K	F	S	P	P	Y	V	I	K	A	D
Template Known Secondary structure		S	G	.	.	.	.	.	.	.	.	.	.	G	G	T				T	T	B	S	S																						T	T								.	.	.			S	S									T	T	S		S	S						S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
		66	.											.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		G	G	G	G	G	R	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	.	.	.	.	.	M	Q	R	R	H
Query Conservation																																																																								.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.
Template Conservation
Template Sequence		G	L	A	R	G	K	G	V	L	I	L	D	S	K	E	E	T	I	E	K	G	S	K	L	I	I	G	E	L	I	K	G	V	K	G	P	V	V	I	D	E	F	L	A	G	N	E	L	S	A	X	A	V	V	N	G	R	N	F	V	I	L	P	F	V	R	D	Y	K	R	L	X	D	G	D	R	G	P	N	T
Template Known Secondary structure		S			S	S							S	S														T	S	S	S	T	T			S										S											T	T																T	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.						.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																		.	.	.	.	.																															.
Query SS confidence																																		.	.	.	.	.																															.
Query Sequence		Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	.	.	.	.	.	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	V	T	E	M	I	T	G	V	D	L	I	K
Query Conservation																																		.	.	.	.	.																															.
Alig confidence												.																						.	.	.	.	.																															.
Template Conservation												.
Template Sequence		G	G	X	G	S	W	G	P	V	E	.	I	P	S	D	T	I	K	K	I	E	E	L	F	D	K	T	L	W	G	V	E	K	E	G	Y	A	Y	R	G	F	L	Y	L	G	L	X	L	H	D	G	D	P	Y	I	L	E	Y	N	V	R	L	G	D	P	E	T	E	V	I	V	T	L	N	P	E	G	F	V	N
Template Known Secondary structure		S		S								.																							T	T															T	T									S	S			T	T
Template Predicted Secondary structure												.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	R	I	A	A	G	Q	P	L	S	I	K	Q	E	E	V	H	V	R	G	H	A	V	E	C	R	I	N	A	E	D	P	N	T	F	L	P	S	P	G	K	I	T	R	F	H	A	P	G	G	F	G	V	R	W	E	S	H	I	Y	A	G	Y	T	V	P	P	Y	Y	D	S	M	I	G	K	L	I	C
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		A	V	L	E	G	Y	R	G	G	K	X	E	P	V	E	P	R	G	F	A	V	D	V	V	L	A	A	R	G	Y	P	D	A	P	E	K	G	K	E	I	T	L	P	E	E	G	L	I	F	F	A	G	V	A	E	K	D	G	K	L	V	T	N	G	G	R	V	.	.	.	.	.	.	.	.	L	H	C	X	G
Template Known Secondary structure									T	S									S										T	T	T	T	T	S						B		B			S	S						S	S					T	T						S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.									.	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		Y	G	E	N	R	D	V	A	I	A	R	M	K	N	A	L	Q	E	L	I	I	D	G	I	.	.	K	T	N	V
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		T	G	E	T	K	E	E	A	R	R	K	A	Y	E	L	A	E	K	V	H	F	E	G	K	T	Y	R	R	D	I
Template Known Secondary structure				S	S																B		T	T		B			T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low